Table 1.
Overview of the The Cancer Genome Atlas (TCGA) datasets used for the analysis.
| Dataset Name (TCGA Abbreviation) | Number of NT | Number of TP | Total |
|---|---|---|---|
| Bladder urothelial carcinoma (BLCA) | 21 | 418 | 439 |
| Breast carcinoma (BRCA) | 96 | 791 | 887 |
| Esophageal carcinoma (ESCA) | 16 | 185 | 201 |
| Head and Neck squamous cell carcinoma (HNSC) | 50 | 528 | 578 |
| Kidney renal clear cell carcinoma (KIRC) | 160 | 324 | 484 |
| Kidney renal papillary cell carcinoma (KIRP) | 45 | 275 | 320 |
| Liver hepatocellular carcinoma (LIHC) | 50 | 377 | 427 |
| Lung adenocarcinoma (LUAD) | 32 | 473 | 505 |
| Lung squamous cell carcinoma (LUSC) | 42 | 370 | 412 |
| Pancreatic adenocarcinoma (PAAD) | 10 | 184 | 194 |
| Prostate adenocarcinoma (PRAD) | 50 | 502 | 552 |
| Thyroid carcinoma (THCA) | 56 | 507 | 563 |
| Uterine Corpus Endometrial Carcinoma (UCEC) | 46 | 438 | 484 |
| Colorectal carcinoma (CRC) | 45 | 411 | 456 |
| Total | 719 | 5783 | 6502 |
NT = Normal tissue, TP = Primary tumor.