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. 2019 Nov 29;10:2820. doi: 10.3389/fimmu.2019.02820

Table 4.

LLWNGPMAV-specific enrichment analysis results for all volunteers from Dewitt et al. (1).

Volunteer Pre-vaccination
full TCR repertoire
Post-vaccination
full TCR repertoire
Post-vaccination
activated TCR repertoire
Identified TCRs % epitope-
specific TCRs
Adjusted p-value enrichment analysis vs. background repertoire Identified
TCRs
% epitope-
specific TCRs
Adjusted p-value enrichment analysis
vs. background repertoire
Adjusted p-value enrichment analysis
vs. pre-vaccination repertoire
Identified
TCRs
% epitope-
specific TCRs
Adjusted p-value enrichment analysis
vs. background repertoire
Adjusted p-value enrichment analysis
vs. pre-vaccination repertoire
1 35 0.010813 0.621 32 0.009094 0.935 0.857 4 0.017189 0.265 0.316
2 48 0.012999 0.384 65 0.015565 1.56e-03 0.212 5 0.028991 0.056 0.116
3 41 0.012539 0.384 87 0.025967 9.29e-14 7.86e-09 181 0.550922 1.86e-239 5.00e-222
4 23 0.009778 0.856 34 0.012084 0.299 0.231 21 0.103128 2.56e-14 1.67e-14
5 8 0.012759 0.621 63 0.020710 7.22e-07 9.93e-04 71 0.423527 7.50e-87 1.56e-79
6 41 0.012111 0.384 32 0.012065 0.299 0.684 8 0.040422 2.31e-03 7.45e-03
7 11 0.006771 0.964 11 0.005344 0.992 0.857 2 0.011544 0.517 0.369
8 22 0.008229 0.964 27 0.010866 0.539 0.212 2 0.011869 0.517 0.404
9 13 0.006451 0.964 18 0.008163 0.938 0.284 4 0.021606 0.176 0.060

The table represents the adjusted p-values (Benjamini-Hochberg adjusted p-values for 9 tests) associated with the LLWNGPMAV-specific enrichment analyses for both full (i.e., derived from PBMC) pre- and post-vaccination TCR repertoires and the post-vaccination activated TCR repertoire. In addition, the number of identified specific TCRs and the percentage of identified specific TCRs are given.