Table 1.
Up-regulated differentially expressed genes (DEGs) after refeeding
| Gene_ID | log2FC | padj | Swissprot Description | Symbol |
|---|---|---|---|---|
| TRINITY_DN53185_c1_g5 | 14.71 | 5.04E-14 | Uncharacterized protein ORF91 | |
| TRINITY_DN28038_c0_g1 | 11.91 | 2.30E-10 | Cell division protein FtsZ | FTSZ |
| TRINITY_DN53185_c1_g3 | 11.67 | 1.31E-12 | Uncharacterized protein ORF91 | |
| TRINITY_DN40074_c2_g1 | 11.21 | 1.49E-08 | Sarcoplasmic calcium-binding protein 1 | |
| TRINITY_DN51715_c1_g6 | 10.96 | 6.10E-11 | Oligopeptide transport ATP-binding protein OppD | OPPD |
| TRINITY_DN46704_c4_g3 | 10.64 | 5.38E-07 | Oligopeptide transport ATP-binding protein OppD | OPPD |
| TRINITY_DN39439_c1_g1 | 10.60 | 4.89E-08 | Myosin heavy chain, muscle | MHC |
| TRINITY_DN51457_c0_g4 | 10.56 | 9.76E-06 | Arginine kinase | |
| TRINITY_DN44733_c0_g1 | 10.38 | 7.90E-08 | Myosin light chain alkali | MLC1 |
| TRINITY_DN36404_c0_g1 | 10.34 | 5.91E-11 | Collagen alpha-1(III) chain | COL3A1 |
| TRINITY_DN36624_c0_g1 | 10.28 | 8.79E-07 | Myosin regulatory light chain 2 | |
| TRINITY_DN62802_c0_g1 | 10.10 | 2.75E-05 | Ribosomal RNA small subunit methyltransferase H | RSMH |
| TRINITY_DN46916_c1_g3 | 9.53 | 2.78E-07 | Tropomyosin | TM1 |
| TRINITY_DN29972_c1_g3 | 9.50 | 4.91E-05 | ATP synthase subunit beta | ATPD |
| TRINITY_DN75810_c0_g1 | 9.44 | 1.72E-03 | DNA-directed RNA polymerase subunit beta’ | RPOC |
| TRINITY_DN46916_c1_g2 | 9.26 | 1.53E-09 | Troponin I | |
| TRINITY_DN51457_c0_g2 | 9.13 | 2.81E-02 | Cytochrome c oxidase subunit 1 | COI |
| TRINITY_DN29188_c0_g1 | 9.09 | 1.09E-06 | Putative transposase InsK for insertion sequence element IS150 | INSK |
| TRINITY_DN30901_c0_g1 | 8.90 | 1.08E-04 | Membrane protein insertase YidC | YIDC |
| TRINITY_DN14841_c0_g1 | 8.88 | 4.80E-03 | L-arabinose transport ATP-binding protein AraG | ARAG |
| TRINITY_DN51715_c1_g8 | 8.76 | 1.02E-03 | Oligopeptide transport ATP-binding protein OppD | OPPD |
| TRINITY_DN55417_c1_g2 | 8.73 | 5.18E-03 | Craniofacial development protein 2 | CFDP2 |
| TRINITY_DN6518_c0_g2 | 8.67 | 6.49E-04 | tRNA-specific 2-thiouridylase MnmA | MNMA |
| TRINITY_DN54848_c1_g1 | 8.58 | 1.22E-02 | Cingulin | CGN |
| TRINITY_DN41914_c0_g2 | 8.55 | 8.58E-04 | von Willebrand factor | VWF |
| TRINITY_DN33939_c0_g1 | 8.53 | 1.43E-07 | Variant surface antigen C | VLPC |
| TRINITY_DN53727_c0_g1 | 8.40 | 2.78E-07 | Troponin T | TNT |
| TRINITY_DN42223_c1_g1 | 8.36 | 4.80E-07 | Actin, alpha cardiac muscle 1 | ACTC1 |
| TRINITY_DN26420_c0_g1 | 8.06 | 1.21E-03 | Fructose-bisphosphate aldolase | ALD |
| TRINITY_DN27809_c1_g2 | 8.00 | 2.00E-02 | 50S ribosomal protein L6 | RPLF |
| TRINITY_DN50962_c2_g1 | 7.95 | 7.78E-03 | Cytochrome c oxidase subunit 3 | COIII |
| TRINITY_DN50547_c1_g2 | 7.92 | 4.03E-02 | Collagen alpha-2(I) chain | COL1A2 |
| TRINITY_DN29972_c1_g4 | 7.81 | 9.29E-03 | Elongation factor Tu | TUF |
| TRINITY_DN21598_c0_g2 | 7.80 | 2.43E-02 | Chaperone protein DnaK | DNAK |
| TRINITY_DN14984_c0_g1 | 7.79 | 2.54E-02 | Pyruvate dehydrogenase E1 component subunit beta | PDHB |
| TRINITY_DN4314_c0_g1 | 7.78 | 3.33E-02 | Putative permease MJ0326 | MJ0326 |
| TRINITY_DN71455_c0_g1 | 7.73 | 2.15E-04 | Membrane-associated lipoprotein | UU045 |
| TRINITY_DN27456_c0_g2 | 7.69 | 1.04E-03 | Troponin C, isoform 1 | |
| TRINITY_DN49873_c2_g2 | 7.67 | 2.37E-03 | Cytochrome c oxidase subunit 1 | MT-CO1 |
| TRINITY_DN57252_c0_g1 | 7.65 | 8.30E-05 | Putative ABC transporter ATP-binding protein MG187 homolog | MPN_134 |
| TRINITY_DN76701_c0_g1 | 7.60 | 5.18E-03 | Pyruvate dehydrogenase E1 component subunit beta | PDHB |
| TRINITY_DN9860_c0_g1 | 7.57 | 2.95E-04 | Ascorbate-specific permease IIC component UlaA | ULAA |
| TRINITY_DN72099_c0_g1 | 7.43 | 1.14E-03 | Lon protease | LON |
| TRINITY_DN37203_c0_g1 | 7.42 | 1.02E-03 | Uncharacterized protein ORF91 | |
| TRINITY_DN50867_c4_g2 | 7.39 | 3.41E-02 | Collagen alpha-2(V) chain | COL5A2 |
| TRINITY_DN39233_c1_g2 | 7.17 | 6.64E-03 | Putative uncharacterized transposon-derived protein F52C9.6 | F52C9.6 |
| TRINITY_DN26948_c0_g1 | 7.15 | 6.88E-03 | Troponin C, isotype gamma | |
| TRINITY_DN57481_c0_g1 | 7.12 | 8.41E-03 | 30S ribosomal protein S2 | RPSB |
| TRINITY_DN42492_c1_g7 | 7.12 | 7.34E-03 | Glyceraldehyde-3-phosphate dehydrogenase | |
| TRINITY_DN76302_c0_g1 | 7.09 | 1.22E-02 | Uncharacterized protein PF11_0207 | PF11_0207 |
| TRINITY_DN20261_c0_g1 | 6.98 | 1.59E-02 | NADH-ubiquinone oxidoreductase chain 2 | MT:ND2 |
| TRINITY_DN31759_c0_g1 | 6.96 | 4.28E-02 | Translation initiation factor IF-2 | INFB |
| TRINITY_DN38000_c0_g1 | 6.92 | 2.90E-02 | RNA-directed DNA polymerase from mobile element jockey | POL |
| TRINITY_DN66334_c0_g1 | 6.80 | 4.92E-02 | PTS system glucose-specific EIICBA component | PTSG |
| TRINITY_DN50552_c0_g2 | 3.93 | 2.48E-04 | Collagen alpha-2(I) chain | COL1A2 |
| TRINITY_DN41454_c2_g1 | 3.02 | 2.00E-02 | Actin, alpha skeletal muscle | ACTA1 |
| TRINITY_DN39818_c0_g2 | 2.52 | 4.02E-02 | Actin, alpha skeletal muscle 2 | ACT2 |
| TRINITY_DN37767_c0_g1 | 2.23 | 2.36E-02 | Thymosin beta | TMSB |
| TRINITY_DN48071_c0_g2 | 1.99 | 3.45E-03 | 60S ribosomal protein L22-like 1 | RPL22L1 |
| TRINITY_DN51452_c2_g2 | 1.98 | 7.99E-03 | Troponin T, fast skeletal muscle | TNNT3 |
| TRINITY_DN50109_c0_g2 | 1.94 | 4.60E-02 | Endothelial lipase | LIPG |
P-value <0.05 indicated different expression between control and fasting-refeeding groups