Table 7.

Alignment summary of reads to the B. taurus reference genome (UMD3.1 Ensembl)

Dataset	Input reads				Pair reads Mapped				Mapping rate
	Total	Average	Min	Max	Total	Average	Min	Max
A_Liver	199,721,632	7,397,097	3,968,542	12,494,809	167,142,561	6,190,465	3,123,525	11,360,856	82%
D_Muscle	317,358,653	6,752,312	4,039,955	9,423,044	285,957,850	6,084,210	3,686,141	8,662,681	89%
H_Liver	579,132,020	10,724,667	5,173,045	11,536,836	529,820,963	10,188,865	9,397,174	10,820,527	91%
H_Blood	538,841,497	11,225,865	8,976,989	11,547,203	462,519,935	9,635,832	7,610,221	10,495,347	85%