Skip to main content
. 2019 Dec 4;12:235–238. doi: 10.2147/TACG.S197205

Table 1.

Summary of the Variants Reported in UniProt, ClinVar & VarSome User Entries for a Given Gene (Version: 18_oct_2019)

Coding Impact Pathogenic Likely Pathogenic Uncertain Significance Likely Benign Benign Total
Synonymous 0 0 34 31 15 80
Missense 199 44 93 2 19 357
Nonsense 27 2 1 0 0 30
Frameshift 29 2 0 0 0 31
Inframe Indel 1 3 0 0 0 4
Splice junction loss 1 1 0 0 0 2
Non-coding 10 10 25 46 101 192
Total 267 62 153 79 135 696

Note: This summary is useful in order to obtain some high-level insights into the modes of pathogenicity for that gene, for example whether synonymous variants mostly benign, or whether the majority of frame-shift variants are pathogenic.