Table 1:
The table presents all the hyper-parameters of the different algorithms that were submitted and an overall evaluation of the algorithm in terms of ICC and Dice.
| Synapse Submission id | Algorithm ID | ICC | DICE | b-value shells | HARDI/Tensor Model | Step size | Threshold angle | Additional Pre-Processing | Post-Processing |
|---|---|---|---|---|---|---|---|---|---|
| syn8533598 | 1A | 0.7753 | 0.6364 | All shells | CSD | 0.2mm | 30 degrees | NA | Distance transform of bundle volumes |
| syn8643780 | 1B | 0.6857 | 0.6596 | All shells | CSD | 0.2mm | 30 degrees | NA | NA |
| syn8643793 | 1C | 0.6343 | 0.6346 | All shells | CSD | 0.2mm | 30 degrees | NA | Distance transform of bundle volumes |
| syn8648608 | 1D | 0.7707 | 0.5402 | All shells | CSD | 0.2mm | 30 degrees | NA | Distance transform of bundle volumes |
| syn8649314 | 1E | 0.6498 | 0.6508 | All shells | CSD | 0.2mm | 30 degrees | NA | NA |
| syn8649322 | 1F | 0.6192 | 0.6197 | All shells | CSD | 0.2mm | 30 degrees | NA | Distance transform of bundle volumes |
| syn8649611 | 1G | 0.6324 | 0.6332 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649618 | 1H | 0.6494 | 0.6503 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649622 | 1I | 0.6517 | 0.6526 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649650 | 1J | 0.6662 | 0.6671 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649652 | 1K | 0.6616 | 0.6624 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649654 | 1L | 0.6362 | 0.637 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649656 | 1M | 0.7093 | 0.7103 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8649658 | 1N | 0.6984 | 0.6994 | All shells | CSD | 0.2mm | 30 degrees | NA | Automatic spurious fiber removal |
| syn8555229 | 2A | 0.8506 | 0.7918 | All shells + 30 HCP subjects | CSD + U-net | 0.2mm | 20 degrees | NA | Spurious Fiber Removal |
| syn8656474 | 3A | 0.7379 | 0.7253 | b1000 and b2000 | Tensor Variant | 0.2mm | 25 degrees | Data Upsampling | NA |
| syn8656475 | 3B | 0.6463 | 0.6341 | b1000 and b2000 | Tensor Variant | 0.2mm | 25 degrees | Data Upsampling | NA |
| syn8662707 | 4A | 0.5285 | 0.5317 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662708 | 4B | 0.5822 | 0.3207 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662709 | 4C | 0.5881 | NaN | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662710 | 4D | 0.5285 | 0.5317 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662711 | 4E | 0.5781 | 0.3182 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662712 | 4F | 0.5835 | NaN | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662713 | 4G | 0.5285 | 0.5317 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662714 | 4H | 0.5291 | 0.4932 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662715 | 4I | 0.5302 | NaN | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662716 | 4J | 0.5285 | 0.5317 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662717 | 4K | 0.5596 | 0.5323 | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8662718 | 4L | 0.5616 | NaN | b3000 | CSD | 0.2mm | 20 degrees | Data Upsampling | NA |
| syn8664905 | 5A | 0.9738 | 0.8231 | All shells | CSD | 1.25mm | 45 degrees | Additional Segmentation | SIFT2 |
| syn8666133 | 6A | 0.7702 | 0.7708 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8666134 | 6B | 0.8358 | 0.5742 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8666135 | 6C | 0.8171 | 0.7595 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8666136 | 6D | 0.817 | 0.7704 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8666137 | 6E | 0.8586 | 0.571 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8666138 | 6F | 0.8458 | 0.7646 | All shells | Tensor Variant | 1mm | 40 degrees | Denoising, Upsampling | Outlier Rejection |
| syn8667007 | 7A | 0.8868 | 0.6187 | b3000 | CSD | 1.25mm | 40 degrees | NA | NA |
| syn8666587 | 8A | 0.86 | 0.8672 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8666598 | 8B | 0.8367 | 0.5166 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8666602 | 8C | 0.8349 | 0.5287 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8666936 | 8D | 0.8901 | 0.6409 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8667021 | 8E | 0.8145 | 0.4983 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8667022 | 8F | 0.8103 | 0.4773 | All shells | Compartment Model | 0.005mm | 60 degrees | NA | Spurious Fiber Removal |
| syn8698866 | 9A | 0.6145 | 0.6015 | All shells | CSD | 0.2mm | 40 degrees | Addtional Segmentation | NA |
| syn8698867 | 9B | 0.6968 | 0.6804 | All shells | CSD | 0.2mm | 40 degrees | Addtional Segmentation | NA |
| syn8698868 | 9C | 0.2703 | 0.2572 | All shells | CSD | 0.2mm | 40 degrees | Addtional Segmentation | NA |