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. 2019 Dec 9;8(12):giz143. doi: 10.1093/gigascience/giz143

Table 1:

N-linked glycans identified in the re-analysis

m/z Centers t-Statistics Adjusted P-values M+Na+ Composition ppm
1,257.47424 38.24 51.97 0 1,257.41 (Hex)2+(Man)3(GlcNAc)2 51
1,743.68713 32.11 48.56 0 1,743.57 (Hex)5+(Man)3(GlcNAc)2 67
1,419.55334 40.68 48.2 0 1,419.47 (Hex)3+(Man)3(GlcNAc)2 59
1,905.68713 48.61 44.78 0 1,905.63 (Hex)6+(Man)3(GlcNAc)2 30
2,304.91211 43.53 42.36 0 2,304.83 (Hex)2(HexNAc)3(deoxyhexose)3+(Man)3(GlcNAc)2 36
1,850.71216 25.3 42.01 0 1,850.65 (Hex)1(HexNAc)3(deoxyhexose)1+(Man)3(GlcNAc)2 34
1,581.62573 18.07 40.64 0 1,581.53 (Hex)4+(Man)3(GlcNAc)2 61
1,809.72461 10.81 38.15 0 1,809.63 (Hex)2(HexNAc)2(deoxyhexose)1+(Man)3(GlcNAc)2 52
2,158.88721 14.77 38.03 0 2,158.77 (Hex)2(HexNAc)3(deoxyhexose)2+(Man)3(GlcNAc)2 54
1,663.66638 10.27 32.26 0 1,663.57 (Hex)2(HexNAc)2+(Man)3(GlcNAc)2 58
1,688.71509 8.68 28.29 0 1,688.61 (HexNAc)3(deoxyhexose)1+(Man)3(GlcNAc)2 62
1,485.62378 8.67 26.89 0 1,485.53 (HexNAc)2(deoxyhexose)1+(Man)3(GlcNAc)2 63
2,012.78394 7.3 26.72 0 2,012.71 (Hex)2(HexNAc)3(deoxyhexose)1+(Man)3(GlcNAc)2 37
2,816.11206 6.92 26.35 0 2,816.01 (Hex)3(HexNAc)4(deoxyhexose)1+(Man)3(GlcNAc)2 36
2,067.75903 5.69 14.52 0 2,067.67 (Hex)7+(Man)3(GlcNAc)2 43
1,542.61902 5.59 8.08 0 1,542.55 (HexNAc)3+(Man)3(GlcNAc)2 45

We could identify 16 N-linked glycans by matching the m/z features of the MSI data (col. 1) to the identified m/z features of the LC-MS/MS experiment (col. 5). We allowed a maximum tolerance of 300 ppm and multiple matches. Only single matches occurred with an average m/z error of 46 ppm (col. 6). Centers, t-statistics and adjusted p-values obtained by the spatial shrunken centroid algorithm are reported in column 2-4. Glycan composition in column 6: Hex: Hexose, Man: Mannose, GlcNAc: N-Acetyl-D-glucosamine, HexNAc: N-Acetyl-D-hexosamine