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. 2019 Nov 22;10:1188. doi: 10.3389/fgene.2019.01188

Table 1.

The genomic coordinates and relative positions of CpG dinucleotides examined.

CpG dinucleotide Regulate gene: transcript Genomic coordinate Relative position to TSS
cg18028808 S100A6: NM_014624 153,513,274 −4556
cg09558069 S100A6: NM_014624 153,510,896 −2178
cg09152105 S100A6: NM_014624 153,509,635 −917
cg10454287 S100A6: NM_014624 153,509,087 −369
cg10673431 S100A11: NM_005620 152,010,110 −598
cg06767701 S100A11: NM_005620 152,008,878 634
cg27102304 S100A11: NM_005620 152,007,390 2122

We tabulated the genomic coordinates (hg19) of the examined CpG dinucleotides on the promoter regions of S100A6 and S100A11. Their positions relative to transcription start site (TSS) were also shown. S100A6 and S100A11 were both located at the minus strand of chromosome 1. The TSSs of NM_014624 and NM_005620 were 153,508,718 and 152,009,512, respectively. The CpG dinucleotides with minus “relative position to TSS” were located at the upstream of TSS, usually called promoter region. The CpG dinucleotides (cg06767701 and cg27102304) with plus “relative position to TSS” were located at the downstream of TSS, also called gene body.