Skip to main content
. 2019 Dec 3;10:2768. doi: 10.3389/fmicb.2019.02768

Figure 2.

Figure 2

Bioinformatic analysis of the genome of the phage SH-KP152226. (A) Gene map of the phage SH-KP152226. Predicted ORFs are shown. The linear map is based on nucleotide sequences of the whole genome. Different color-coded ORFs represent distinct functions: yellow for phage DNA packaging and morphogenesis; blue for phage DNA replication, recombination, and modification; red for host lysis; gray for unclassified functions; and green for hypothetical proteins. The red circle denotes ORF42, the gene encoding the putative polysaccharide depolymerase. (B) Bioinformatic analysis of the putative depolymerase of the phage SH-KP152226. Based on in silico analysis using integrated information from BLASTp and HHpred, the result depicts a 793-aa protein with two conserved region structures: phage T7 tail fiber protein (residue 1~154) and pectate lyase 3 with a beta-helix structure (residue 300~599).