Table 2.
True heritability | Method | Estimate | |||
---|---|---|---|---|---|
Heritability | Breeding value | ||||
Mean | MCSE | Correlation | Regression | ||
0.1 | GS | 0.10 | 0.005 | 0.52 | 0.99 |
HMC | 0.11 | 0.004 | 0.52 | 0.99 | |
NUTS | 0.10 | 0.001 | 0.53 | 1.10 | |
0.3 | GS | 0.32 | 0.004 | 0.68 | 0.91 |
HMC | 0.31 | 0.002 | 0.68 | 0.93 | |
NUTS | 0.30 | 0.001 | 0.68 | 0.96 | |
0.5 | GS | 0.51 | 0.004 | 0.79 | 0.98 |
HMC | 0.52 | 0.003 | 0.79 | 0.97 | |
NUTS | 0.51 | 0.002 | 0.79 | 0.99 |
MCSE Monte Carlo standard error, GS Gibbs sampling, HMC Hamiltonian Monte Carlo, NUTS No-U-Turn Sampler