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. 2019 Sep 18;33(11):12960–12971. doi: 10.1096/fj.201900932R

TABLE 1.

Primer sequences for real-time RT-PCR analysis of RPTKs and PTK7

Gene Nucleotide sequence, 5′–3′
Nucleotide positiona
GenBank accession no.
Forward Reverse Forward Reverse
FGFR1 CCTGGTGACAGAGGACAAGTGATG CCGGTCAAATAATGCCTCGGG 2829–2853 2967–2946 NM_023110.2
FGFR2 CCCCCTGCGGAGACAGGTAAC CAGGGGCTTGCCAGTGTC 1913–1934 2108–2090 NM_000141.4
FGFR3 CCGTGACGTCCACCGACGAG GGGGACCAGTGGCCCTTCAC 2514–2534 2693–2673 NM_000142.4
FGFR4 GCGGCGTCCACCACATTGAC CACCCGGTCAAACAAGGCCTC 2119–2139 2210–2189 NM_002011.4
FGFRL1 AGGGCAAGGTCCACCAGCAC TGCTGGCCATTCCTCCTCGC 1627–1647 1780–1760 NM_001004356.2
FLT1 CCTCCTGCGAAACCTCAGTG AGGCTCGGGGACACCATTAG 2271–2290 2355–2336 NM_002019.4
KDR TTGGTGGAATGGTGCCCAGC AGTGTGGTCCCCGAGTCAGGC 4147–4167 4354–4333 NM_002253.2
FLT3 GTTCACGAACCCCCTGAAATTG ACACGTGCTCTGGAAGGAATG 3556–3577 3618–3598 NM_004119.2
FLT4 GCACAGGAGTGTCCTCTTCC TCTGAATCTCAGGGGGAGGG 4274–4293 4415–4396 NM_182925.4
c-KIT AGGAGTGGGAAAACACTGCC AGGACCCTCTTGGACTCAGG 4010–4029 4194–4175 NM_000222.2
PDGFRB GTCCTTCAGGCCCATCAGTC CCGTCTGGCCTTCTAGACTC 4507–4526 4590–4571 NM_002609.3
CSF1R CGTCTGGTCCTATGGCATCC GGGTAGGGATTCAGCCCAAG 2803–2822 2862–2843 NM_005211.3
PTK7 AGAGATGCCCCATGGTGGGC ACGGCTTGCTGTCCACGGTG 3156–3176 3359–3339 U40271
GAPDH ACTGCTTAGCACCCCTGGCCA TTGGCAGTGGGGACACGGAAG 488–508 740–720 BC023632
a

Nucleotide position of cDNA target sequence is shown.