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. 2019 May 24;13(12):1578–1582. doi: 10.1093/ecco-jcc/jjz104

Figure 1.

Figure 1.

Manhattan plot showing the –log10[p] values for each single nucleotide polymorphism [SNP] in the HRC Imputation Panel with p < 0.01, computed using Bolt-LMM and plotted using an in-house MATLAB script which we have made publicly available on the MATLAB File Exchange.16 The horizontal dashed line is the genome-wide significance threshold at p = 5 × 10–8. The strongly significant signal on chromosome 6 lies in the HLA region, with lead SNP rs2596560, p = 3 × 10–8.