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. 2019 Dec 4;10:1540. doi: 10.3389/fpls.2019.01540

Table 2.

Genotype-specific parameters from APSIM that were used in this study, with the lower and upper limits for the simulated population, and the default value of the parameter in the released version of APSIM.

Parameter APSIM name Units Default APSIM low_lim high_lim References
Fraction of leaves senescing per main stem node fr_lf_sen_rate [] 0.035 0.028 0.042 (Christopher et al., 2016)
Number of grains per gram of stem at flowering grains_per_gram_stem grains gstem1 25 20 25 (Dodig et al., 2012)
Lower limit for water uptake ll_modifier [] 1 0.9 1.1 (Manschadi et al., 2006)
Maximum grain size max_grain_size mg 0.041 0.03 0.06 (Groos et al., 2003)
Sensitivity to photoperiod photop_sens [] 2 1.5 3 (Zheng et al., 2013)
Potential grain filling rate potential_grain_filling_rate g grain−1 day−1 0.0025 0.0016 0.0026 (Wang et al., 2009)
Transpiration efficiency coefficient transp_eff_cf [] 0.006 0.0045 0.0065 (Fletcher and Chenu, 2015; Fletcher et al., 2018)
Thermal time required to reach floral initiation tt_floral_initiation oC d 555 455 555 Within the range of (Zheng et al., 2013)
Sensitivity to vernalization vern_sens [] 1.5 1.5 2.5 (Zheng et al., 2013)
Canopy extinction coefficient y_extinct_coef [] 0.45 0.4 0.6 (Isidro et al., 2012)
Biomass partitioning to leaf y_frac_leaf [] 0.6 0.55 0.65 (Álvaro et al., 2008)
Radiation use efficiency y_rue g MJ−1 1.24 1.01 1.4 (Acreche et al., 2009)

For all traits, the marginal Gamma distribution had the following parameters; shape (determining the skewness) k = 1.299 and a rate (inverse scale parameter) b = 13.6, except for photop_sens, tt_floral_initiation and vern_sens, for which k = 0.700 and b = 13.6. When units are indicated with [], it means that the parameter is dimensionless.