Table 2.
Comparison of CIBERSORT immune fractions between HNC HPV positive patients and negative patients.
| Immune cells | Normal means | Tumor means | logFC | P Value |
|---|---|---|---|---|
| B cells memory | 2.17E−05 | 0.004647 | 7.741616 | 0.000231 |
| B cells naive | 0.014956 | 0.024706 | 0.724158 | 0.518213 |
| Dendritic cells activated | 0.03191 | 0.021905 | −0.54275 | 0.065003 |
| Dendritic cells resting | 0.031514 | 0.02751 | −0.19604 | 0.891241 |
| Eosinophils | 0.001891 | 0.000123 | −3.94557 | 0.718216 |
| Macrophages M0 | 0.247879 | 0.154108 | −0.6857 | 0.009724 |
| Macrophages M1 | 0.091053 | 0.110677 | 0.281571 | 0.359036 |
| Macrophages M2 | 0.097167 | 0.069925 | −0.47465 | 0.011035 |
| Mast cells activated | 0.020716 | 0.008805 | −1.23435 | 0.02111 |
| Mast cells resting | 0.027321 | 0.031731 | 0.215875 | 0.178435 |
| Monocytes | 0.003497 | 0.001689 | −1.04969 | 0.88545 |
| Neutrophils | 0.013373 | 0.001426 | −3.22932 | 0.007963 |
| NK cells activated | 0.015302 | 0.020886 | 0.448863 | 0.179469 |
| NK cells resting | 0.0288 | 0.017236 | −0.74063 | 0.038035 |
| Plasma cells | 0.060632 | 0.083056 | 0.454019 | 0.184296 |
| T cells CD4 memory activated | 0.034592 | 0.053941 | 0.640956 | 0.028705 |
| T cells CD4 memory resting | 0.144439 | 0.050991 | −1.50214 | 3.15E-07 |
| T cells CD4 naive | 1.00E-05 | 0 | Inf | 0.563299 |
| T cells CD8 | 0.071886 | 0.181113 | 1.3331 | 4.11E-07 |
| T cells follicular helper | 0.031526 | 0.061919 | 0.973848 | 2.12E-05 |
| T cells gamma delta | 0.003494 | 0.007961 | 1.187876 | 0.002974 |
| T cells regulatory (Tregs) | 0.028021 | 0.065644 | 1.228147 | 0.000502 |