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Quality of GBS data
| Genotype | Raw base (bp) |
Clean base (bp) |
Effective rate (%) |
Error rate (%) |
Q20 (%) |
Q30 (%) |
GC (%) |
|---|---|---|---|---|---|---|---|
| PI531718 | 6,496,632,288 | 6,496,632,288 | 100 | 0.03 | 95.97 | 93.68 | 43.95 |
| PI531750 | 1,064,120,832 | 1,064,117,088 | 100 | 0.04 | 95.96 | 89.20 | 42.99 |
| 8801 | 1,254,284,064 | 1,254,281,472 | 100 | 0.05 | 95.00 | 87.17 | 42.13 |
| K17–841-1 | 1,271,704,608 | 1,271,701,440 | 100 | 0.05 | 94.71 | 86.58 | 43.17 |
