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. 2019 Dec 11;8(12):giz135. doi: 10.1093/gigascience/giz135

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© The Author(s) 2019. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 4: — UMCCR Arteria cloud infrastructure. When a commit is pushed to our GitHub repository and validated by TravisCI, it proceeds to our autoscaling group “arteria,” which subsequently deploys cloud instances, incorporating the new Arteria and StackStorm code changes. After changes are deployed, any incoming events, such as a new sequencing run being completed, are handled by this newly deployed code and data are copied from the sequencers to our university HPC center for further downstream processing with bcbio [24].