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. 2019 Dec 12;20:972. doi: 10.1186/s12864-019-6211-2

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Characterization of variants and their frequency among Zinfandel selections and other vinifera cultivars (Pinot Noir, Chardonnay, Merlot, Cabernet Franc, and Sauvignon Blanc). Only variant sites at which all samples were called by GATK (All non-Zinfandel clones and Zin03, left-hand column; All clones, right-hand column) were used. The normalized rate of variants (number of variants divided by the total feature length in the genome * 1 k) by type (SNV, INDEL), feature (Intergenic, Intron, Exon), and genotype (Non-Zinfandel cultivars, Zinfandel clones). Boxplots show the 25th quartile, median, and 75th quartile