Table 2.
Summary statistics of the Zinfandel genome assembly and annotation
| Primary | Haplotig | |
|---|---|---|
| Total length | 591,171,721 | 306,029,957 |
| Number of contigs | 1509 | 2246 |
| N50 | 1,062,797 | 442,393 |
| N75 | 366,308 | 185,785 |
| L50 | 154 | 200 |
| L75 | 395 | 463 |
| Median contig length (bp) | 161,249 | 37,307 |
| Longest contig (bp) | 7,901,503 | 2,609,171 |
| Shortest contig (bp) | 17,787 | 1970 |
| Average GC content (%) | 34.45% | 34.37% |
| Number of genes | 33,523 | 20,037 |
| Total | Average per gene | |
| Number of exons | 244,880 | 4.57 |
| Number of introns | 191,320 | 3.57 |
| Average (bp) | Maximum (bp) | |
| mRNA lengths | 4166 | 94,143 |
| Exon lengths | 245.79 | 7992 |
| Intron lengths | 191,320 | 41,647 |
| Intergenic distances | 10,309 | 302,473 |