Table 2. Differentially expressed genes related to biotic stress in transgenic citrus independently overexpressing CsGH3.1 and CsGH3.1L.
| Gene ID | Putative function | Log2 Fold change* (Transgenic line vs WT) |
|
|---|---|---|---|
| 1–9 | L-5 | ||
| Stress recognition | |||
| Orange1.1t02076 | Disease resistance-responsive family protein | -1.005 | -2.029 |
| Orange1.1t03601 | LRR receptor-like kinase FLS2 | 2.755 | 1.412 |
| Cs2g16870 | MLP-like protein 31 (MLP31) | 2.198 | 3.223 |
| Cs2g17820 | ARM repeat superfamily protein | 1.177 | 3.669 |
| Cs2g29780 | HXXXD-type acyl-transferase family protein | 1.436 | 3.488 |
| Cs2g31450 | Acetyl coa:(Z)-3-hexen-1-ol acetyltransferase (CHAT) | -1.365 | 1.685 |
| Signal receptor | |||
| Cs5g18230 | Toll-Interleukin-Resistance (TIR) domain family protein | 2.044 | 1.717 |
| Cs5g27950 | Leucine-rich repeat I receptor kinase | -2.207 | -2.005 |
| Cs5g15420 | Leucine-rich repeat VIII (VIII-2) receptor kinase | 1.262 | 1.429 |
| Cs9g14980 | Leucine-rich repeat XI receptor kinase | -1.142 | -2.069 |
| Orange1.1t01442 | Leucine-rich repeat XI receptor kinase | -2.353 | -1.839 |
| Orange1.1t03106 | Leucine-rich repeat XI receptor kinase | 1.394 | 1.342 |
| Cs4g07400 | Serine/threonine receptor kinase | 3.036 | 1.785 |
| Orange1.1t01406 | DUF 26receptor kinase | -1.357 | -1.596 |
| Signal transduction | |||
| Cs1g17210 | JAZ1 involved in jasmonate signaling | 1.173 | 2.883 |
| Cs1g17220 | JAZ1 involved in jasmonate signaling | 1.143 | 2.371 |
| Cs6g17590 | Calmodulin-like protein | 1.321 | 1.482 |
| Cs7g27120 | Calmodulin binding protein-like | 1.230 | 1.591 |
| Cs5g07160 | Calmodulin like 37 (CML37) | 1.288 | 1.996 |
| Cs2g15970 | Rac-like GTP-binding protein RAC2 | -2.151 | -1.370 |
| Cs2g21150 | Mitogen-activated protein kinase kinase kinase 18 (MAPKKK18) | 1.286 | 3.530 |
| Orange1.1t01873 | Tobacco Rapid Alkalinization Factor (RALF) | -1.357 | -1.438 |
| Cs9g05280 | AHP1 Arabidopsis thaliana histidine phosphotransfer protein | -1.134 | -1.235 |
| Cs7g09390 | Phototropic-responsive NPH3 family protein | -1.633 | -1.696 |
| Cs9g07670 | Chlorophyll A-B binding family protein | -1.136 | -2.031 |
| Defense response gene | |||
| Cs6g01070 | NB-ARC domain-containing disease resistance protein | 2.089 | 1.506 |
| Cs9g18740 | Disease resistance family protein / LRR family protein defense | 2.640 | 2.459 |
| Cs8g14950 | Glucan endo-1,3-beta-glucosidase | -1.567 | 1.177 |
| Cs3g06300 | Receptor like protein 6 (RLP6) | -1.089 | 1.200 |
| Cs5g19240 | Disease resistance protein (TIR-NBS-LRR class) | 2.180 | 1.563 |
| Redox metabolism | |||
| Cs2g17910 | Cytochrome b561/ferric reductase transmembrane protein family | -1.646 | -1.768 |
| Cs5g32580 | Thioredoxin superfamily protein | 1.316 | 1.028 |
| Cs2g16150 | GRX480, the glutaredoxin family that regulates protein redox state | 1.436 | 1.806 |
| Orange1.1t03455 | Probable glutathione S-transferase, gsts, Auxin-induced protein | -1.777 | -1.624 |
| Cs2g15310 | Peroxidase superfamily protein | -1.918 | -1.385 |
| Responsive transcription factor | |||
| Cs6g15360 | The DREB subfamily A-1 of ERF/AP2 transcription factor (CBF4) | 2.032 | 4.256 |
| Cs9g16810 | The DREB subfamily A-1 of ERF/AP2 transcription factor (CBF4) | 1.725 | 2.039 |
| Orange1.1t01154 | The DREB subfamily A-1 of ERF/AP2 transcription factor (CBF2) | 1.543 | 2.840 |
| Cs1g07950 | The ERF subfamily B-1 of ERF/AP2 transcription factor (ATERF-4) | 1.913 | 2.078 |
| Cs4g07040 | The DREB subfamily A-5 of ERF/AP2 transcription factor family | 5.413 | 2.803 |
| Cs5g29830 | Member of the R2R3 factor gene family (MYB14) | 1.249 | 2.333 |
| Cs2g27410 | Member of the R2R3 factor gene family (MYB58) | 3.896 | 4.470 |
| Cs3g23070 | Member of the R2R3 factor MYB gene family (MYBR1) | 2.909 | 2.012 |
| Cs3g23950 | Member of the R2R3 factor gene family (MYB73) | 2.235 | 3.114 |
| Cs1g03870 | Group II-c WRKY Transcription Factor (WRKY51) | 3.168 | 1.313 |
| Protein degradation | |||
| Cs2g18910 | Encode a protein similar to subtilisin-like serine protease | -1.763 | -2.831 |
| Cs2g27790 | Cysteine proteinases superfamily protein | 3.370 | 1.277 |
| Cs9g06150 | Eukaryotic aspartyl protease family protein | 1.971 | 3.298 |
| Cs2g29430 | Skp2-like F-box family protein | -2.364 | -2.155 |
| Cs3g14660 | F-box family protein; RNI-like superfamily protein | 1.338 | 1.078 |
| Cs6g13640 | E3 ubiquitin ligase protein involved in PAMP-triggered immunity | 1.070 | 2.153 |
*Differentially expressed genes having |Log2 (Fold change)| ≥ 1 are presented.