TABLE 1.
Data on genomes of isoprene-degrading bacteria isolated in this study together with representative closely related isoprene-degrading and non isoprene-degrading strains.
| Strain | Genome size (Mbp) | mol% G + C | N50 | Number of contigs | Coding sequences | tRNAs | % Completeness (coverage)∗ | Reference |
| Ramlibacter sp. strain WS9 | 7.05 | 65.3 | 57140 | 487 | 6614 | 54 | 94.6 (78 x) | This study |
| Ramlibacter tataouinensisTTB310 | 4.07 | 70 | – | 1 | 3984 | 47 | – | Heulin et al., 2003 |
| Variovorax sp. strain WS11 | 8.57 | 67.2 | 96557 | 581 | 8130 | 58 | 95.5 (141 x) | This study |
| Variovorax paradoxus S110 | 6.75 | 67.5 | 5626353 | 2 | 6365 | 67 | – | Han et al., 2011 |
| Gordonia sp. strain OPL2 | 5.80 | 67.3 | 149633 | 154 | 5372 | 52 | 94.6 (180 x) | This study |
| Gordonia sp. i37 | 6.23 | 66.8 | 16524 | 721 | 5587 | 53 | – | Johnston et al., 2017 |
| Rhodococcus sp. strain WS3 | 6.86 | 61.7 | 24 | 6600 | 58 | 94.6 (560 x) | This study | |
| Rhodococcus sp. strain WS4 | 12.74 | 66.4 | 40486 | 1261 | 12726 | 65 | 94.6 (28 x) | This study |
| Rhodococcus sp. strain WS7 | 6.63 | 62.4 | 451949 | 183 | 6356 | 65 | 94.6 (64 x) | This study |
| Rhodococcus sp. strain AD45 | 6.79 | 61.7 | 1521985 | 9 | 6522 | 54 | – | Crombie et al., 2015 |
| Rhodococcus sp. RHA1 | 9.70 | 67.0 | 7804765 | 4 | 9458 | 64 | – | McLeod et al., 2006 |
∗The characteristics of genomes of isoprene-degrading bacteria (shown in bold) are compared with representative members of their genus. Completeness was determined using the MiGA webserver (Rodriguez-R et al., 2018).