Table 2.
Number of proteins that showed increased expression (fold change) under each condition compared to sucrose control
| Genome | Number of proteins with fold change > 0 under any condition compared to sucrose (% of total CDS) |
Number of proteins with fold change > 0 when grown in chitin vs sucrose (% of total CDS) |
Number of proteins with fold change > 0 when grown in grass vs sucrose (% of total CDS) |
Number of proteins with fold change > 0 when grown in pine vs sucrose (% of total CDS) |
Number of proteins with fold change > 0 under all three conditions compared to sucrose (% of total CDS) |
|---|---|---|---|---|---|
| Aspergillus CK392 (FGC_1) | 315(3.6%) | 104(1.2%) | 101(1.2%) | 110(1.3%) | 72(0.8%) |
| Coniochaeta CK134 (FGC_2) | 2275(21.4%) | 809(7.6%) | 876(8.2%) | 590(5.6%) | 481(4.5%) |
| Embellisia CK46 (FGC_3) | 1504(12.5%) | 631(5.2%) | 347(2.9%) | 526(4.4%) | 246(2.0%) |
| Chaetomium CK152 (FGC_4) | 2306(19.5%) | 1050(8.9%) | 731(6.2%) | 5254.5%) | 398(3.4%) |
| Phoma CK108 (FGC_5) | 975(9.5%) | 307(3.0%) | 318(3.1%) | 350(3.4%) | 148(1.5%) |
Data for this table were compiled from Additional file 3. CDS: coding sequences