Table 2.
Antibodies used for immunocytochemistry/flow-cytometry | |||
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Antibody | Dilution | Company Cat # and RRID | |
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Pluripotency Markers | Mouse anti-SOX2 | 1:50 | R & D systems, Cat# MAB2018, RRID: AB_358009 |
Pluripotency Markers | Rabbit anti-NANOG | 1:400 | Cell signaling, Cat# 4903, RRID: AB_10559205 |
Pluripotency Markers | Rabbit anti-OCT4 | 1:400 | Thermo Fisher, Cat# A13998, RRID: AB_2534182 |
Pluripotency Markers | Mouse anti-SSEA4 | 1:1000 | Cell signaling, Cat# 4755, RRID: AB_1264259 |
Pluripotency Markers | Mouse anti- TRA-1–60 | 1:1000 | Cell signaling, Cat# 4746, RRID: AB_2119059 |
Secondary Antibodies | Donkey anti-Mouse IgG (Alexa Fluor 488) | 1:400 | Thermo Fischer, Cat# A21202, RRID: AB_141607 |
Secondary Antibodies | Donkey anti-Rabbit IgG (Alexa Fluor 594) | 1:400 | Thermo Fischer, Cat# A21207, RRID: AB_141637 |
Flow Cytometry Antibodies | Anti-Tra-1–60-DyLight 488 | 1:50 | Thermo Fischer, Cat# MA1–023-D488X, RRID: AB_2536700 |
Flow Cytometry Antibodies | Anti-Nanog-Alexa Fluor 488 | 1:50 | Millipore, Cat# FCABS352A4, RRID: AB_10807973 |
Flow Cytometry Antibodies | Mouse-IgM-DyLight 488 | 1:50 | Thermo Fischer, Cat# MA1–194-D488, RRID: AB_2536969 |
Flow Cytometry Antibodies | Rabbit IgG-Alexa Fluor 488 | 1:50 | Cell Signaling, Cat# 4340S, RRID: AB_10694568 |
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Primers | |||
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Target | Forward/Reverse primer (5′–3′) | ||
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Sev specific primers (RT-PCR) | Sev/181 bp | F: GGA TCA CTA GGT GAT ATC GAG C R: ACC AGA CAA GAG TTT AAG AGA TAT GTA TC |
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Sev specific primers (RT-PCR) | KOS/528 bp | F: ATG CAC CGC TAC GAC GTG AGC GC R: ACC TTG ACA ATC CTG ATG TGG |
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Sev specific primers (RT-PCR) | Klf4/410 bp | F: TTC CTG CAT GCC AGA GGA GCC C R: AAT GTA TCG AAG GTG CTC AA |
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Sev specific primers (RT-PCR) | C-Myc/523 bp | F: TAA CTG ACT AGC AGG CTT GTC G R: TCC ACA TAC AGT CCT GGA TGA TGA TG |
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House-Keeping gene (RT-PCR) | GAPDH/197bp | F: GGA GCG AGA TCC CTC CAA AAT R: GGC TGT TGT CAT ACT TCT CAT GG |
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Targeted mutation analysis (PCR) | NGLY1 (c.1201A > T)/258bp | F: GAC AAC AGA GCG AGA CTT C R: AAA AAG ATA GCC ACA CCA TAC C |