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. 2019 Dec 13;14(12):e0226177. doi: 10.1371/journal.pone.0226177

Table 2. Sequences and G-scores of 2 x 4 and 3 x 4 G-quadruplex regions located on the ribosomal surface of the Homo sapiens 28S rRNA (LSU).

Number Region LSU rRNA Sequence (5’ to 3’) Highest G-score
1 ES7-a GGCGGCGGGUCCGGCCGUGUCGGCGGCCCGGCGG 20
2 ES7-a GGGGGCGGGCUCCGGCGGGUGCGGGGGUGGGCGGGCGGGGCCGGGGGUGGGGUCGGCGGGGG 60
3 ES7-b GGCGGGGAAGGUGGCUCGGGGGG 19
4 ES7-b GGGAGGGCGCGCGGGUCGGGGCGGCGGCGGCGGCGGCGGUGGCGGCGGCGGCGGCGGCGGCGGG 38
5 ES7-g GGGCCCGGGGGAGGUUCUCUCGGGG 19
6 ES12 GGCUCGCUGGCGUGGAGCCGGGCGUGG 20
7 ES15 GGACGGGAGCGGCGGGGGCGG 21
8 ES15 GGAGGGCGGCGGCGGCGGCGGCGGCGGGGGUGUGGGG 21
9 H63 GGGCUGGGUCGGUCGGGCUGGGG 38
10 ES27-a GGGGGAGCGCCGCGUGGGGGCGGCGGCGGGGGGAGAAGGGUCGGGGCGGCAGGGGCCGGCGGC
GGCCCGCCGCGGGGCCCCGGCGGCGGGGGCACGG
40
11 ES27-a GGGGGGCCCGGGCACCCGGGGGGCCGGCGGCGGCGGCGACUCUGG 37
12* ES27-b GGCGGGCGUCGCGGCCGCCCCCGGGGAGCCCGGCGGGCGCCGG 20
13 ES27-b GGGGGCGGGGAGCGGUCGGGCGGCGGCGGUCGGCGGGCGGCGGGGCGGGGCGG 21
14 ES27-b GGCGCGCGGCGGCGGCGGCGGCAGGCGGCGGAGGGGCCGCGGGCCGG 21
15 ES30 GGGGCCCGGGGCGGGGUCCGCCGGCCCUGCGGGCCGCCGG 21
16 ES39 GGGACCGGGGUCCGGUGCGG 20
17 ES39 GGGAAACGGGGCGCGGCCGGAGAGGCGG 20

*This region contains a loop longer than 7 nucleotides

These regions meet both 3 x 4 and 2 x 4 criteria.