Antibodies |
|
|
Topo IIB |
Santa Cruz |
Cat#SC-48429; RRID:AB_628383 |
GAPDH |
Santa Cruz |
Cat#SC-25778; RRID:AB_10167668 |
UCP1 |
Abcam |
Cat#ab10983; RRID:AB_2241462 |
FLAG |
Cell signaling |
Cat#14793S; RRID:AB_2572291 |
Zc3h10 (Immunoblotting) |
ThermoFisher |
Cat#PA5-31814; RRID:AB_2549287 |
Zc3h10 (ChIP) |
Abnova |
Cat#H00084872-B01P; RRID:AB_1643833 |
P-S126 Zc3h10 |
Genemed Synthesis Inc. |
N/A |
ATF2 |
Cell signaling |
Cat#35031; RRID:AB_2799069 |
P-ATF2 |
Abcam |
Cat#ab32019; RRID:AB_725567 |
Phosphoserine |
Millipore |
Cat#ab1603; RRID:AB_390205 |
Bacterial and Virus Strains |
|
|
Ad-Zc3h10-flag |
ViraQuest |
N/A |
Ad-Zc3h10-shRNA |
Vector Biolabs |
Cat#shADV-276549 |
Chemicals, Peptides, and Recombinant Proteins |
|
|
MitoTracker Green |
Cell signaling |
Cat#9074 |
LipidTox Red Reagent |
ThermoFisher |
Cat#H34476
|
Duolink Mounting medium with DAPI |
Sigma-Aldrich |
Cat#DUO82040 |
CL-316,243 |
Sigma-Aldrich |
Cat#C5976 |
SB203580 |
Sigma-Aldrich |
Cat# S8307 |
Critical Commercial Assays |
|
|
LightShift Chemiluminescent EMSA Kit |
Thermofisher |
Cat#20148 |
SimpleChIP kit |
Cell Signaling |
Cat##56383 |
Mitochondria Isolation Kit for Tissue |
Thermofisher |
Cat#89801 |
NE-PER Nuclear and Cytoplasmic Extraction kit |
ThermoFisher |
Cat#78833 |
Dual-Luciferase Kit |
Promega |
Cat#E1980 |
Deposited Data |
|
|
Raw and analyzed data |
This paper |
GEO: GSE139029
|
Experimental Models: Cell Lines |
|
|
3T3-L1 |
UCB Cell Culture Facility |
N/A |
HEK293FT |
UCB Cell Culture Facility |
N/A |
Experimental Models: Organisms/Strains |
|
|
Mouse: AQ-Zc3h10 |
This Laboratory |
N/A |
Mouse: AQ-Zc3h10-mutZfp1/2 |
This Laboratory |
N/A |
Mouse: UCP1-Cre B6.FVB-Tg(Ucp1-cre)1Evdr/J |
The Jackson Laboratory |
024670 |
Oligonucleotides |
|
|
See Table S1 for RT-qPCR and ChIP primers |
|
N/A |
See Table S2 for gel shift probes |
|
N/A |
Recombinant DNA |
|
|
pCMV-3Tag3A |
Agilent |
Cat#240195 |
pGEX-4T-3 |
GE Healthcare |
Cat#28-9545-52 |
Software and Algorithms |
|
|
MACS |
Zhang et al., 2008 |
https://github.com/taoliu/MACS/ |
GREAT |
McLean et al., 2010 |
http://great.stanford.edu/public/html/ |
MEME |
Bailey and Elkan, 1994 |
http://meme-suite.org/tools/meme |