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. Author manuscript; available in PMC: 2020 Nov 27.
Published in final edited form as: Cell Syst. 2019 Nov 6;9(5):434–445.e6. doi: 10.1016/j.cels.2019.10.001

Key Resources Table

REAGENT or RESOURCE SOURCE IDENTIFIER
Yeast strains
Schizosaccharomyces pombe: h− wild-type strain 972 Chang lab collection FC15
S. pombe: h− cdc25-22 Chang lab collection FC342
S. pombe: h− sec6-GFP-ura4+ leul-32 ura4- Chang lab collection FC1037
S. pombe: h− ssp2::ura4+ leul-32 ura4-D18 Chang lab collection FC1503
S. pombe: h-gad8::ura4+ leu1-32 ura4-D18 Chang lab collection FC1507
S. pombe: h-gad8::ura4+ leu1-32 ura4-D18 Chang lab collection FC1507
S. pombe: h− pmk1::ura4+ leu1-32 ura4-D18 Chang lab collection FC1551
S. pombe: h− sty1::ura4+ leu1-32 ura4-D18 Chang lab collection FC1568
S. pombe: h− cch1::ura4+ leu1-32 ura4-D18 Chang lab collection FC1596
S. pombe: h− fim1-meGFP-kanMX6 Chang lab collection FC1897
S. pombe: h− rga4-RFP::kanMX6 leu1-32 ura4-D18 Chang lab collection FC1902
S. pombe: h− ost1-GFP::ura4+ rlcl-RFP::ura4+leu1-32 ura4-D18 Chang lab collection FC1919
S. pombe: h− trn1-GFP::kanMX6 ade6- leu1-32 ura4-D18 Chang lab collection FC2086
S. pombe: h− yop1-GFP::kanMX6 ade6- leu1-32 ura4-D18 Chang lab collection FC2087
S. pombe: h− leu1:2xGFP-bgs4 leu1+ ura4+ Chang lab collection FC2255
S. pombe: h− gma12-GFP-ura4+ leu1:tdTom-bgs1 leu1+ ura4+ Chang lab collection FC2277
S. pombe: h+ pom1-tomato-natMX, cdr2-GFP-kanMX ade6- leu1-32 ura4-D18 Chang lab collection FC2678
S. pombe: h− gpd1::kanMX leu1-32 Chang lab collection FC2810
S. pombe: h− tdh1-dendra2:ura4 ade6- leu1-32 ura4-D18 Chang lab collection FC2840
S. pombe: h+ hta1-mCherry:kanMX GFP-atb2:kanMX ade6- leu1-32 ura4- Chang lab collection FC2859
S. pombe: h+ GFP-atb2:kanMX ade6- leu1-32 ura4-D18 Chang lab collection FC2861
S. pombe: h− leu1-tomato-bgsl psy1-GFP-leu1 Chang lab collection FC2913
S. pombe: h+ act1p::1XE2C:HygR ura4-D18 leu1-32 ade6-M210 his7-366 Chang lab collection FC3186
S. pombe: h− rps802-GFP::kanMX leu1-32 ura4-D18 ade6-M210 Chang lab collection FC3208
S. pombe: h− rps2-GFP::kanMX leu1-32 ura4-D18 ade6-M210 Chang lab collection FC3209
S. pombe: h+ rpl1601-GFP::kanR leu1-32 ura4-D18 ade6-M210 Chang lab collection FC3210
S. pombe: h− rpl2801-GFP::kanMX leu1-32 ura4-D18 ade6- Chang lab collection FC3212
S. pombe: h+ rps2401-GFP::kanR leu1-32 ura4-D18 ade6-M216 Chang lab collection FC3213
S. pombe: h+ rpl3001-GFP::kanR leu1-32 ura4-D18 ade6-M216 Chang lab collection FC3215
S. pombe: h− [pREP42-pnmt1-PfV-GS-Sapphire-tnmt1] leu1-32 ura4-D18 ade6-M216 This manuscript FC3238
Chemicals, Peptides, and Recombinant Proteins
YE5S rich media Sunrise Science Cat. #YES-225
Edinburgh Minimal Media (EMM) US Biological Cat. #E2205
Difco agar Fisher Scientific Cat. # DF0812-07-1
D-Sorbitol Sigma-Aldrich Cat. #S1876
D-Glucose Sigma-Aldrich Cat. #G8270
Adenine Sigma-Aldrich Cat. #A8626
Leucine Sigma-Aldrich Cat. #L8000
Histidine Sigma-Aldrich Cat. #H8000
Cycloheximide Sigma-Aldrich Cat. #C7698
Brefeldin A Sigma-Aldrich Cat. #B7651
Wheat Germ Agglutinin, Alexa Fluor 488 Conjugate Life Technologies Cat. # W11261
Fluorescein isothiocyanate (FITC) Sigma-Aldrich Cat. # F7250
Propidium iodide (PI) Sigma-Aldrich Cat. #P4170
RNase A ThermoFisher Cat. #EN0531
Bovine serum albumin Sigma-Aldrich Cat. #A3608
Software and Algorithms
Morphometries v. 1.1 (Tyanova et al., 2016) https://simtk.org/projects/morphometrics
DeepCell (Van Valen et al. 2017) https://hub.docker.com/r/vanvalen/deepcell/
ImageJ v. 1.51 NIH https://imagej.nih.gov
MOSAIC for ImageJ (Shivanandan et al., 2013) https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-14-349
μManager v. 1.4 (Edelstein et al., 2014a) N/A
MATLAB 2017a MathWorks www.mathworks.com/products/matlab.html
Other
0.45-μm filter Millipore HAWP04700
Microfluidic perfusion plates CellASIC Cat. #Y04C
ONIX microfluidic platform CellASIC N/A
Nikon Eclipse Ti-E inverted fluorescence microscope Nikon N/A
Yokogawa confocal spinning disk CSU-10 Yokogawa N/A
Andor Diskovery multi-modal system Andor N/A
Borealis illumination system Andor N/A
Integrated laser system (488 nm, 561 nm) Andor N/A
OBIS 488 nm laser Coherent N/A
EM-CCD camera Hamamatsu N/A
iXon Ultra EM-CCD camera Andor N/A
Zyla 4.2 sCMOS camera Andor N/A
Active-control environmental chamber Haison Technology N/A
Active-control environmental chamber Okolab N/A