REAGENT or RESOURCE	SOURCE	IDENTIFIER
Data Deposited and Resource data
18S rRNA gene metabarcoding (Tara Oceans)	de Vargas et al., 2015; this paper	European Nucleotide Archive (ENA): PRJEB6610 and PRJEB9737
Metagenomics, 0.22-1.6/3 μm (OM-RGCv2, Tara Oceans)	Salazar et al., 2019	ENA - See https://zenodo.org/record/3473199 for details
Metagenomics, < 0.22 μm (GOV 2.0, Tara Oceans)	Gregory et al., 2019	ENA - See their Table S3 for details
ZooScan imaging - regent net, 680 μm (Tara Oceans)	This paper	EcoTaxa, https://ecotaxa.obs-vlfr.fr/prj/412
ZooScan imaging - bongo net, 300 μm (Tara Oceans)	This paper	EcoTaxa, https://ecotaxa.obs-vlfr.fr/prj/397, https://ecotaxa.obs-vlfr.fr/prj/398, https://ecotaxa.obs-vlfr.fr/prj/395
ZooScan imaging - WP2 net, 200 μm (Tara Oceans)	This paper	EcoTaxa, https://ecotaxa.obs-vlfr.fr/prj/377, https://ecotaxa.obs-vlfr.fr/prj/378
Contextual data (Tara Oceans)	Sunagawa et al., 2015; this paper	https://doi.org/10.1594/PANGAEA.875582
CMIP5 Earth system models	Bopp et al., 2013	See our Table S1H for details
Sample identifiers & Shannon values; flow cytometry abundances	This paper; Sunagawa et al., 2015	http://dx.doi.org/10.17632/p9r9wttjkm.1
Software and Algorithms
R package mgcv 1.8-24	Wood, 2010	https://cran.r-project.org/web/packages/mgcv/index.html
R package segmented 0.5-3.0	Muggeo, 2008	https://cran.r-project.org/web/packages/segmented/index.html