DEG	Differentially expressed genes
FDR	False discovery range
GDC	Genomic Data Commons
HNSCC	Head and neck squamous cell carcinoma
HPV	Human papilloma virus
RNA-seq	RNA sequencing
MAF	Mutations annotation format
HR-HPV	High-risk human papilloma virus
SCNA	Somatic copy number alterations
SNP	Single nucleotide polymorphisms
TCGA	The cancer genome atlas
TSS	Transcription start site