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. Author manuscript; available in PMC: 2021 Jan 1.
Published in final edited form as: Ticks Tick Borne Dis. 2019 Sep 27;11(1):101309. doi: 10.1016/j.ttbdis.2019.101309

Table 1.

Primers used to amplify rickettsial genes. These primers were used to amplify outer membrane protein A (ompA), outer membrane protein B (ompB), gene D (sca4), citrate synthase (gltA), and 16S rRNA.

Gene Fragment Size Primers Reference
ompA 540-bp 190-FN1 5′-AAGCAATACAACAAGGTC
190-RN1 5′-TGACAGTTATTATACCTC
(Paddock et al., 2004)
ompB 1895-bp RompB11F 5’-ACCATAGTAGCMAGTTTTGCAG
Rompl902R 5’CCGTCATTTCCAATAACTAACTC
(Jiang et al., 2005)
sca4 928-bp D1F 5’-ATGAGTAAAGACGGTAACCT
D928R 5’- AAGCTATTGCGTCATCTCCG
(Jiang et al., 2005)
gltA 830-bp CS239 5′ GCTCTTCTCATCCTATGGCTATTAT
CS1069 5′ CAGGGTCTTCGTGCATTTCTT
(Labruna et al., 2004)
16S rRNA 757-bp Ric 5’- TCTAGAACGAACGCTATCGGTAT
Ric Rt 5’- TTTCATCGTTTAACGGCGTGGACT
(Nilsson et al., 1997)
16S rRNA 1385-bp Ric 5’- TCTAGAACGAACGCTATCGGT AT
Ric U8 5’- TGCGTTAGCTCACCACCTTCAGG
(Nilsson et al., 1997)