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. Author manuscript; available in PMC: 2020 May 25.
Published in final edited form as: Nat Catal. 2019 Nov 25;2(12):1115–1123. doi: 10.1038/s41929-019-0382-8

Table 1. Activity and selectivity of wild-type UAXS and variant enzymes for conversion of UDP-GlcA (2).

Enzyme kcat[a] [min-1] UDP-apiose
(1a) [%]
UDP-xylose
(3) [%]
UDP-4-keto-xylose[b] (5) [%] Apiose cyclic 1,2-phosphate (1)
[%]

Wild-type 0.49 59 26 8 7
Y185F 0 n.a. n.a. n.a. n.a.
Y105F 0.05 18 41 32 9
Y105A 0.13 0 50 50 0
T139V 3 × 10-3 0 0 100 0
C100A 0.12 18 61 15 6
C100S 0.09 0 21 79 0
C140S 0.07 29 26 35 10
C140A 0.11 15 33 52 0
C100A/C140S 0.23 27 32 33 8
E141A 3 × 10-3 0 0 100[b] 0

[a]

Activity (kcat) was measured by HPLC-UV as depletion of substrate in H2O at pH 7.0 (Supplementary Figures 17-32). Selectivity for product formation was determined by 1H-NMR in D2O (pD 7.0) (Supplementary Figure 33-35). Reaction conditions: 50 mM potassium phosphate buffer; 30 °C; 2 mM substrate; 0.1 mM NAD+ (1.0 mM for T139V and E141A variants). An appropriate enzyme concentration between 0.5 and 14.3 mg/mL was used. Note: there was no solvent isotope effect on the kcat (see Supplementary Figure 36). n.a. = not applicable. Data are from multiple determinations have relative S.D. ≤ 10% (except Y105F, 20%; see Supplementary Figures 17-32).

[b]

22 mg/mL enzyme added for 1H-NMR measurement.