Table 1. Activity and selectivity of wild-type UAXS and variant enzymes for conversion of UDP-GlcA (2).
Enzyme | kcat[a] [min-1] | UDP-apiose (1a) [%] |
UDP-xylose (3) [%] |
UDP-4-keto-xylose[b] (5) [%] | Apiose cyclic 1,2-phosphate (1) [%] |
---|---|---|---|---|---|
Wild-type | 0.49 | 59 | 26 | 8 | 7 |
Y185F | 0 | n.a. | n.a. | n.a. | n.a. |
Y105F | 0.05 | 18 | 41 | 32 | 9 |
Y105A | 0.13 | 0 | 50 | 50 | 0 |
T139V | 3 × 10-3 | 0 | 0 | 100 | 0 |
C100A | 0.12 | 18 | 61 | 15 | 6 |
C100S | 0.09 | 0 | 21 | 79 | 0 |
C140S | 0.07 | 29 | 26 | 35 | 10 |
C140A | 0.11 | 15 | 33 | 52 | 0 |
C100A/C140S | 0.23 | 27 | 32 | 33 | 8 |
E141A | 3 × 10-3 | 0 | 0 | 100[b] | 0 |
Activity (kcat) was measured by HPLC-UV as depletion of substrate in H2O at pH 7.0 (Supplementary Figures 17-32). Selectivity for product formation was determined by 1H-NMR in D2O (pD 7.0) (Supplementary Figure 33-35). Reaction conditions: 50 mM potassium phosphate buffer; 30 °C; 2 mM substrate; 0.1 mM NAD+ (1.0 mM for T139V and E141A variants). An appropriate enzyme concentration between 0.5 and 14.3 mg/mL was used. Note: there was no solvent isotope effect on the kcat (see Supplementary Figure 36). n.a. = not applicable. Data are from multiple determinations have relative S.D. ≤ 10% (except Y105F, 20%; see Supplementary Figures 17-32).
22 mg/mL enzyme added for 1H-NMR measurement.