Skip to main content
. 2019 Nov 19;11(22):10742–10770. doi: 10.18632/aging.102473

Table 1. Studies showing ASD associated genes that contribute to ASD phenotypes through different signaling pathways.

Genes in ASD Genes affecting signaling pathways Mutations contributing to autistic phenotypes References
Calcium/Calmodulin Dependent Protein Kinase IV (CAMKIV) CaM signaling Deficits in learning and memory formation [13, 119]
Calcium/Calmodulin Dependent Protein Kinase II (CAMKIIα) CaM signaling Memory impairment [13, 171, 220]
Synaptic Ras GTPase Activating Protein 1 (SYNGAP1) Excitatory/glutamatergic signaling Non-syndromic mental retardation [42, 221]
Glutamate Ionotropic Receptor NMDA Type Subunit 2B (GRIN2B) Excitatory/glutamatergic signaling Deficits in learning and memory [42, 222]
Fibroblast Growth Factor 7 (FGF7) FGF signaling Epileptic seizures [116, 184]
Metabotropic glutamate receptor (mGLUR5) FGF signaling Aberrant dendrite growth leading to cognitive abnormalities [119, 223, 224]
Sodium Voltage-Gated Channel Alpha Subunit 1 (SCN1A) GABA signaling Cognitive and behavioral deficits [225, 236]
Methyl-CpG Binding Protein 2 (MECP2) GABA signaling Cognitive and behavioral deficits, impaired coordination [194]
Solute Carrier Family 6 Member 11 (SLC6A11) GABA signaling Cognitive deficits [30, 227]
Neurexin 1 (NRXN1) GABA and glutamate signaling Cognitive impairments, behavioral and learning deficits [228230]
Glutamate Ionotropic Receptor Delta Type Subunit 1 (GRID1) Glutamate signaling Impaired emotional and social behaviors [231]
Calcium Voltage-Gated Channel Subunit Alpha1 C (CACNA1C) Glutamate signaling Impaired memory, hippocampal plasticity and anxiety-related behavior [232]
SH3 And Multiple Ankyrin Repeat Domains 1 (SHANK1) Glutamate signaling Increased anxiety, reduced long-term memory [31]
SH3 And Multiple Ankyrin Repeat Domains 2 (SHANK2) Glutamate signaling Increased anxiety, impaired social behaviors [31]
Glycine Receptor Alpha 2 (GLRA2) Glycinergic signaling Deficits in learning and memory [102]
Tuberous Sclerosis Complex Subunit 1 and 2 (TSC1 and TSC2) mTOR signaling pathway Learning deficit and impaired social behavior [233]
Neurofibromin 1 (NF1) mTOR signaling pathway Learning and attention deficits [233]
Fragile X Mental Retardation 1 (FMR1) mTOR signaling pathway Cognitive deficits, increased anxiety [233]
Contactin Associated Protein Like 2 (CNTNAP2) mTOR signaling Impaired social and repetitive behaviors [234, 235]
Phosphatase and Tensin Homolog (PTEN) mTOR signaling pathway ASD like social behavior [233]
Homer Homolog 1 HOMER1 mGLUR signaling Learning and memory deficits [60, 236]
Molybdenum Cofactor Sulfurase (MOCOS) Purine metabolism pathway Autistic features [54]
Retinoid-Related Orphan Receptor-Alpha (RORA) Retinoic acid (RA) signaling Language impairment [80, 237]
Forkhead Box N1 (FOXN1) Retinoic acid (RA) signaling Brain alterations contributing to autistic features (hypothetical) [238, 239]
Aldehyde Dehydrogenase 1 Family Member A3 (ALDH1A3) Retinoic acid (RA) signaling Autistic traits [183]
Patched Domain Containing 1 (PTCHD1) Sonic hedgehog (SHH) signaling Cognitive alterations [116, 175]
7-Dehydrocholesterol Reductase (DHCR7) Sonic hedgehog (SHH) signaling Intellectual impairment [116, 177]
Engrailed Homeobox 2 (EN2) Sonic hedgehog (SHH) signaling Deficits in social behavior [116, 240]
Distal-Less Homeobox (DLX) TGF-β/BMP signaling Autism like behaviors [116, 241, 242]
Thyroid Hormone Receptor Alpha 1 (THRA1) Thyroid pathway Impaired memory, anxiety, locomotor dysfunction [243, 244]
Parkinsonism Associated Deglycase 2 (PARK2) Ubiquitin pathway Impaired speech and stereotypical behaviors [89, 245]
Chromodomain Helicase DNA Binding Protein 8 (CHD8) Wnt signaling (canonical) Defective neural progenitor proliferation and differentiation [121]
Catenin Beta 1 (CTNNB1) Wnt signaling (canonical) Defect in brain development [246, 247]
Prickle Planar Cell Polarity Protein 2 (PRICKLE2) Wnt signaling (non-canonical) Abnormalities in behavior, learning and social interaction [248]
Transducin Beta Like 1 X-Linked (TBL1X) Wnt signaling Intellectual disability and autistic features [249]
SH3 And Multiple Ankyrin Repeat Domains 3 (SHANK3) Wnt signaling Delayed or absent speech, intellectual disability [58, 246, 250]
Adenomatosis Polyposis Coli (APC) Wnt signaling Memory impairment, autistic behaviors [251]
Ubiquitin Protein Ligase E3A (UBE3A) Wnt signaling Developmental delay, learning difficulties [252, 253]
Glycogen Synthase Kinase 3 Beta (GSK3β) Wnt signaling Anxiety and impaired social interaction [13, 254]
Disrupted in Schizophrenia 1 (DISC1) Wnt signaling Failure is establishment of long-term synaptic potentiation (LTP) causing learning and memory deficits [119]
Dedicator of Cytokinesis 4 (DOCK4) Wnt signaling Suppression of dendrite growth causing impairments in cognitive and language abilities [123]
Transcription Factor 7 Like 2 (TCF7L2) Wnt signaling Cognitive and sensorimotor impairments [119, 255]
Neuroligin 3 and 4 (NLGN3 and NLGN4) Wnt signaling Failure in synapse formation resulting in impaired communication abilities [97, 119]
Dual Specificity Tyrosine Phosphorylation Regulated Kinase 1A (DYRK1A) Wnt signaling Head size abnormalities [134, 256]
Transducin Beta Like 1 X-Linked Receptor 1 (TBL1XR1) Wnt signaling Delayed language development [257]
DIX Domain Containing 1 (DIXDC1) Wnt signaling Impaired social behavior and anxiety [116, 126]
Ankyrin 3 (ANK3) Wnt signaling Autistic features [116, 258]
Prostaglandin E2 (PGE2) Wnt signaling Hyperactivity, repetitive behaviors and anxiety [116, 259]