Table 5. Summary of multidimensional external validation results base on multiple databases.
Database | MUC1/MUC1 | ITGAX/CD11c | Results | ||
Cancer | Normal | Cancer | Normal | ||
Oncomine | ↑ | ↓ | - | - | Across ten analysis, MUC1 was highly expressed in primary STS compared to normal tissue while CD11c (Gene symbol: ITGAX) showed no difference (Supplementary Figure 5). |
CCLE | ↑ | NA | - | NA | At the cellular level, MUC1 was expressed in various STS cell lines while ITGAX expression was low STS cell lines (Supplementary Figure 6). |
cBioPortal | ↑ | ↓ | - | - | MUC1 and ITGAX were highly expressed in primary STS compared to some other types of cancer and they had a significant co-expression pattern in STS (Supplementary Figure 7). |
GTEx | NA | ↓ | NA | ↓ | MUC1 and ITGAX were lowly expressed in normal adipose tissue and smooth muscle tissue (Supplementary Figure 8). |
UCSC Treehouse | ↑ | ↓ | - | - | MUC1 was highly expressed in primary STS compared to normal soft tissue while ITGAX did not (Supplementary Figure 8). |
The Human Protein Atlas | NA | ND | NA | ND | Protein MUC1 and CD11c were almost not detected in normal adipose tissue and smooth muscle tissue (Supplementary Figure 9). |
Note: “↑” was defined as a significantly upregulated gene; “↓” was defined as a significantly downregulated gene; “-” was defined as a a gene with no significant difference in expression; “NA” was defined as “Not available”; “ND” was defined as “Not detected”;
Abbreviations: CCLE: Cancer Cell Line Encyclopedia; GTEx: Genotype-Tissue Expression; UCSC: University of California, Santa Cruz