Table 1.
List of heat shock proteins have suppressed expression in samples inoculated with virulent rpg4/5 isolates when compared to avirulent rpg4/5
| Gene ID | Barley Annotation | Vir rpg4/5 vs Avr rpg4/5 | Vir rpg4/5 inoculated vs Control | Avr rpg4/5 inoculated vs Control | |||
|---|---|---|---|---|---|---|---|
| FCa | P-valueb | FCc | P-valueb | FCd | P-valueb | ||
| HORVU4Hr1G063350 | heatshockprotein21 | −24.9 | 3.6E-07 | 3.8 | 0.88 | 94.9 | 5.57E-04 |
| HORVU3Hr1G007500 | 16.9kDaclassIheatshockprotein1 | −14.5 | 3.6E-09 | 20.4 | 0.05 | 307.4 | 4.95E-07 |
| HORVU2Hr1G077710 | 22kDaclassIVheatshockprotein | −11.9 | 4.6E-03 | 2.3 | 1.00 | 27.9 | 9.51E-02 |
| HORVU4Hr1G060760 | 17.9kDaclassIheatshockprotein | −10.4 | 2.4E-04 | 10.8 | 0.77 | 118.5 | 1.62E-03 |
| HORVU3Hr1G006530 | 16.9kDaclassIheatshockprotein1 | −8.8 | 1.6E-06 | 6.4 | 1.00 | 59.7 | 1.18E-03 |
| HORVU4Hr1G059260 | Heatshock70kDaprotein3 | −6.1 | 1.2E-03 | 14.1 | 0.04 | 85.5 | 8.02E-05 |
| HORVU4Hr1G067430 | Heatshock70kDaprotein8 | −5.2 | 1.5E-02 | 4.4 | 1.00 | 23.5 | 1.94E-01 |
| HORVU4Hr1G015170 | 17.6kDaclassIIheatshockprotein | −4.2 | 4.4E-02 | 10.9 | 0.77 | 47.5 | 1.23E-02 |
| HORVU3Hr1G007380 | 16.9kDaclassIheatshockprotein2 | −3.9 | 6.4E-04 | 21.1 | 0.12 | 87.23 | 6.09E-05 |
| HORVU7Hr1G081510 | DnaJ/Hsp40cysteine-richdomainsuperfamilyprotein | −3.63 | 2.0E-06 | −22.69 | 0.00 | −6.33 | 0 |
aNegative values represents significantly lower expression of genes specific to rpg4/5-virulent Pgt inoculated samples compared to rpg4/5 avirulent Pgt inoculated samples
bFalse discovery rate (FDR) corrected P-value. FDR corrected P-value < 0.05 are considered as significantly differentially expressed for given comparison
cNegative values represents significantly lower expression of genes specific to rpg4/5-virulent Pgt inoculated samples compared to non-inoculated control samples
dPositive values represents significantly higher expression of genes specific to rpg4/5-avirulent Pgt inoculated samples compared to non-inoculated controls