Table 1. CNCDriver identified 21 putative insulator drivers, Related to Figure 1B.
Hepatocellular carcinoma (Liver), bladder urothelial carcinoma (BLCA), ovarian serous cystadenocarcinoma (Ovarian), uterine corpus endometrial carcinoma (UCEC), esophageal adenocarcinoma (ESAD), kidney cancer (Renal), colon adenocarcinoma (Colon), breast invasive carcinoma (BRCA), pancreatic adenocarcinoma (Pancreatic), and skin cutaneous melanoma (Melanoma).
Chromosome | Insulator coordinate | Cancer Type |
---|---|---|
1 | chr1:212206519-212210488 | PanCancer |
3 | chr3:101946566-101949238 | Liver |
3 | chr3:193851483-193857734 | PanCancer |
6 | chr6:27762081-27764969 | BLCA, PanCancer |
6 | chr6:28804618-28807508 | Ovarian |
6 | chr6:36644706-36649293 | UCEC |
6 | chr6:52859174-52860790 | PanCancer |
6 | chr6:73119843-73123728 | ESAD |
7 | chr7:148659158-148661781 | Renal |
7 | chr7:86865236-86868101 | Ovarian |
7 | chr7:96808154-96810356 | Colon, PanCancer |
8 | chr8:114448350-114451616 | ESAD |
12 | chr12:109830993-109832475 | BRCA |
14 | chr14:21076653-21082688 | Pancreatic |
16 | chr16:22206566-22208078 | BLCA, PanCancer |
16 | chr16:22307639-22310495 | Ovarian, Renal, PanCancer |
17 | chr17:8021414-8027560 | PanCancer |
19 | chr10:103602281-103604334 | UCEC |
19 | chr19:12901682-12905667 | Ovarian |
19 | chr19:17969769-17971490 | Melanoma |
19 | chr19:41767305-41771623 | Melanoma, PanCancer |