Table 2.
Summary of cross-reactive clones by anti-PD-1 antibody.
| Clone no. | 2nd SC well no. | Entry clone ID | Accession no. | Gene name | Similar epitope region | Similar epitope sequence | Epitope | Mutant name | Mutant sequence |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9–39/40 | FLJ83286WAAF | 11181995 | hCG2007644 | 8–16 | ••LPRRAQRLW•• | ○ | m1 | ••LAAAAARLW•• |
| 74–82 | ••CGLSAQYLV | × | m2 | ••CGLAAAAAV | |||||
| 2 | 13–9/10 | FLJ53560AAAF | AK297376.1 | unnamed protein product | 247–254 | ••TPRSAPSS•• | × | m1 | ••TAAAAASS•• |
| 257–263 | ••FPRSAQK | ○ | m2 | ••FAAAAAK | |||||
| 3 | 13–35/36 | FLJ54115AAAF | NM_001257159.1 | centrosomal protein of 41 kDa isoform 3 | 253–261 | ••GARSAQNLP•• | ○ | m1 | ••GAAAAAALP•• |
| 4 | 15–23/24 | FLJ94476AAAF | NP_005009.2 | programmed cell death 1 | 270–278 | ••GPRSAQPLR•• | ○ | m | ••GAAAAAPLR•• |
*The amino acids identical with PD1 epitope sequence are shown as bold.