Table 2. Characteristics of our study sample, TCGA lung cancer, and 1000Genome data.
| PSHMC LUAD (n = 53) | PSHMC LUSC (n = 41) | TCGA LUAD_NB (n = 307) | TCGA LUAD_TP (n = 381) | TCGA LUSC_NB (n = 203) | TCGA LUSC_TP (n = 300) | PSHMC Non-cancer (n = 94) a | White in 1000Genome Phase 3 (n = 185) b | |
|---|---|---|---|---|---|---|---|---|
| Median age (years old) | 70, (Male: 71; Female: 68.5) |
73, (Male: 73; Female: 70) |
67, (Male: 66.5; Female: 67) |
67, (Male: 66.5; Female: 67) |
68, (Male: 68; Female: 69.5) |
68, (Male: 68; Female: 69) |
58, (Male: 61; Female: 56) |
NA |
| Range of age (years old) | 48–90, (Male: 54–84; Female: 48–90) | 40–84, (Male: 54–81; Female: 40–84) | 33–88, (Male: 38–88; Female: 33–87) | 33–88, (Male: 38–88; Female: 33–87) | 44–85, (Male: 46–85; Female: 44–83) | 40–85, (Male: 40–85; Female: 44–83) | 40–85, (Male: 41–82; Female: 40–85) | NA |
| Male : Female (ratio) | 23 : 30 (1 : 1.3) | 28 : 13 (2.15: 1) | 140 : 167 (1 : 1.2) | 172 : 209 (1 : 1.2) | 151 : 52 (2.9 : 1) | 219 : 81 (2.7 : 1) | 34 : 60 (1 : 1.8) | 80 : 102 (1 : 1.3) |
LUAD (lung adenocarcinoma)
LUSC (lung squamous cell carcinoma)
NB (blood normal)
TP (tumor patient)
aLee SY et al. PLoS One. 2017;12(3):e0174778. [40]
bThere are a total of 1,077 samples (527 male, 550 female) listed on the website, however, only a subset have sequences. There are 185 European subpopulation (80 male, 102 female, 3 unknown). Age information is not available.