Table 2.
TopControl-assigned scores for 33 disease-associated genes and miRNAs reported in DisGeNET and HMDD databases that belong to the constructed TFmiR complete network for the BRCA dataset, see Table 1.
| gene | D | hub | mds | mcds | score | LFC |
|---|---|---|---|---|---|---|
| ESR2 | 7 | 1 | 1 | 1 | 3 | 2.58 |
| FOS | 20 | 1 | 1 | 1 | 3 | 2.47 |
| E2F1 | 25 | 1 | 1 | 1 | 3 | 2.34 |
| ESR1 | 19 | 1 | 1 | 1 | 3 | 1.79 |
| JUN | 45 | 1 | 1 | 1 | 3 | 1.6 |
| STAT5A | 7 | 1 | 1 | 1 | 3 | 1.6 |
| ETS2 | 6 | 1 | 1 | 1 | 3 | 1.15 |
| TFAP2A | 24 | 1 | 1 | 1 | 3 | 0.9 |
| hsa-mir-21 | 44 | 1 | 1 | 1 | 3 | — |
| hsa-mir-146a | 31 | 1 | 1 | 1 | 3 | — |
| WT1 | 2 | 0 | 1 | 1 | 2 | 5.39 |
| IFNB1 | 9 | 1 | 0 | 1 | 2 | 4.13 |
| FOXM1 | 1 | 0 | 1 | 1 | 2 | 3.54 |
| KIT | 6 | 1 | 0 | 1 | 2 | 2.79 |
| IL6 | 7 | 1 | 0 | 1 | 2 | 2.76 |
| FOXA1 | 3 | 0 | 1 | 1 | 2 | 1.87 |
| RARB | 6 | 1 | 1 | 0 | 2 | 1.1 |
| TRERF1 | 1 | 0 | 1 | 1 | 2 | 1.08 |
| HEY2 | 1 | 0 | 1 | 1 | 2 | 1.06 |
| MEIS1 | 1 | 0 | 1 | 1 | 2 | 1.01 |
| NR2F6 | 2 | 0 | 1 | 1 | 2 | 1 |
| KRAS | 1 | 0 | 1 | 1 | 2 | 0.83 |
| AR | 5 | 0 | 1 | 1 | 2 | 0.63 |
| ERBB2 | 6 | 1 | 0 | 0 | 1 | 1.89 |
| BRCA2 | 4 | 0 | 0 | 1 | 1 | 1.81 |
| AFP | 1 | 0 | 1 | 0 | 1 | 1.43 |
| EGFR | 8 | 1 | 0 | 0 | 1 | 1.4 |
| PDGFA | 2 | 0 | 0 | 1 | 1 | 1.33 |
| BRCA1 | 5 | 0 | 0 | 1 | 1 | 1.24 |
| PARP1 | 1 | 0 | 1 | 0 | 1 | 1.2 |
| CCND1 | 15 | 1 | 0 | 0 | 1 | 1.01 |
| PGR | 5 | 0 | 0 | 1 | 1 | 0.87 |
| ZEB1 | 1 | 0 | 1 | 0 | 1 | 0.72 |