Table 2.
Antibiotic resistance genes on the assembled chromosome and plasmid sequences in K. quasipneumoniae NGKPC-421 strain (ENA ERS3013985)
| Namea | MLST/pMLST | Size (Kb) | CDS/GC content | Resistance genes | Predicted phenotype |
|---|---|---|---|---|---|
| Chromosome | ST3510 | 5255.70 | 5816/57.35 | blaOKPB-3 | β-lactam |
| oqxA | Fluoroquinolone | ||||
| oqxB | Fluoroquinolone | ||||
| pKPC-421 plasmid | IncX6 | 39.40 | 58/47.32 | blaKPC-2 | β-lactam |
| pBK30683-like plasmid | IncFII | 136.16 | 199/55.48 | n/a | n/a |
| pKq-NGSA-1 plasmid | IncFII(k) | 204.00 | 303/53.31 | aac(3)lla | Aminoglycoside |
| aac(3″)lb | Aminoglycoside | ||||
| aac(6′)lb-cr | Fluoroquinolone | ||||
| aac(6)ld | β-lactam | ||||
| blaOXA-1 | Phenicol | ||||
| blaCTX-M-15 | |||||
| blaTEM-1B | |||||
| qnrB1 | Fluoroquinolone | ||||
| catB3 Sul2 | Sulphonamide | ||||
| tet(A) | Tetracycline | ||||
| drA14 | Trimethoprim | ||||
| pK245 plasmid | IncR | 134.81 | 188/53.68 | blaCTX-M-14b | β-lactam |
aAssembly of K. quasipneumoniae NGKPC-421 sequences resulted in 6 contigs comprising of 1 chromosome and 4 putative circular plasmids (Note: 2 contigs represent the pKq-NGSA-1 plasmid)