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. 2019 Nov 27;116(51):25668–25676. doi: 10.1073/pnas.1909026116

Table 1.

Ligand-binding affinity of QTY code designed chemokine receptor (E. coli)

CCL5* Kd, nM CXCL11 Kd, nM CXCL12* Kd, nM CXCL13 Kd, nM CCL27 Kd, nM CCL28 Kd, nM gp41-120 Kd, nM
CXCR4 native ∼5 ∼200
CXCR4QTY buffer 17.3 ± 4.2 7.0 ± 1.9
CXCR4QTY serum 31.4 ± 12.2 12.7 ± 2.6
CXCR5 native ∼50.5
CXCR5QTY buffer 5.7 ± 2.2
CXCR5QTY serum 10.1 ± 2.6
CXCR7 native ∼8 ∼4.5 N/A
CXCR7QTY buffer 6.4 ± 1.2 6.7 ± 2.2 34.3 ± 6.1
CXCR7QTY serum 51.5 ± 11.8 16.9 ± 3.4 50.0 ± 11.1
CCR5 native ∼4 ∼10
CCR5QTY buffer 6.8 ± 2.0 1.3 ± 0.5
CCR5QTY serum 29.0 ± 8.9 2.1 ± 0.6
CCR10 native ∼5.6 ∼38
CCR10QTY buffer 4.2 ± 1.4 38.5 ± 8.0
CCR10QTY serum 6.2 ± 2.4 52.7 ± 7.1
*

CCL5 is also called “Rantes,” and CXCL12 is also called “SDF1α” in the literature.

The Kd ∼200 nM was measured by a cell-based assay.

All QTY code designed chemokine receptors were purified from E. coli inclusion bodies and renatured in refolding buffer.