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. 2019 Dec 23;12(Suppl 10):187. doi: 10.1186/s12920-019-0625-1

Table 3.

The results of the eight criteria obtained by 5 ×5-fold cross-validation over Data-201706 for the nine competing methods in total

Method AUC AUPR micro-AUC micro-AUPR macro-AUC macro-AUPR leaf-AUC leaf-AUPR
LR 0.775 0.028 0.760 0.072 0.579 0.052 0.532 0.020
BiRW 0.875 0.066 0.826 0.096 0.732 0.056 0.597 0.031
OGL 0.785 0.051 0.776 0.078 0.603 0.034 0.536 0.014
DLP 0.902 0.073 0.875 0.100 0.736 0.094 0.659 0.055
NMF 0.961 0.496 0.900 0.273 0.753 0.139 0.701 0.089
NMF-PPN 0.963 0.525 0.902 0.281 0.756 0.142 0.703 0.089
NMF-NHPO 0.965 0.541 0.903 0.290 0.756 0.144 0.702 0.094
AiPA 0.970 0.559 0.905 0.295 0.760 0.146 0.705 0.096
HPOAnnotator 0.971 0.562 0.907 0.296 0.760 0.152 0.706 0.097

Method performs best in terms of this evaluation metric are in boldface