Table 1.
Association Between Genetic and Prediction of T2DM
Probable Mechanism | Genes | Chromosome Position | SNPs | Population | Allele (Risk/Other) | Ref. No. |
---|---|---|---|---|---|---|
Insulin action | KLF14 | 7q32.3 | rs972283 | Han Chinese | G/A | [11] |
Northern Germany | G/A | [12] | ||||
DUSP9 | Xq28 | rs5945326 | Northern Germany | A/G | [12] | |
Japanese | A/G | [16] | ||||
Pakistani | A/G | [17] | ||||
Han Chinese | A/G | [18] | ||||
β-cell function | KCNQ1 | 11p15.5 | rs2237895 | Han Chinese | C/A | [11] |
Japanese, Asian, European | C | [13] | ||||
rs2237892 | Japanese, Asian, European | C | [13] | |||
rs2074196 | Japanese, Asian, European | G | [13] | |||
rs2283228 | Eastern Finland | A/C | [14] | |||
Asian Indian | A/C | [15] | ||||
rs231362 | Northern Germany | G/A | [12] | |||
SLC30A8 | 8q24.11 | rs13266634 | Japanese | C/T | [23] | |
Lebanese | – | [24] | ||||
Tunisian Arabs | – | [24] | ||||
HNF4A | 20q13.12 | rs2425637 | Finnish | G/T | [25] | |
rs6130608 | French-Canadian | T/C | [26] | |||
rs736824 | French-Canadian | T/C | [26] | |||
rs745975 | French-Canadian | C/T | [26] | |||
rs3212183 | French-Canadian | C/T | [26] | |||
rs4812829 | South Asian | A/G | [27] | |||
IGFBP2 | 3q27 | rs4402960 | Northen Han Chinese | T/G | [28] | |
Tunisian | T/G | [29] | ||||
rs1470579 | Tunisian Arabs | – | [24] | |||
Lebanese | – | [24] | ||||
Northen Han Chinese | C/A | [28] | ||||
CDKN2A/B | 9p21.3 | rs10811661 | Indian | T/C | [30] | |
Pakistani | T/C | [17] | ||||
Mexican | T/C | [31] | ||||
Chinese She | T/C | [32] | ||||
Chinese | T/C | [33] | ||||
Uyghur | T/C | [34] | ||||
Han Chinese | T/C | [35] | ||||
TCF7L2 | 10q.25.2–25.3 | rs7903146 | Spaniards | T/C | [36] | |
Austrians | T/C | [37] | ||||
Lebanese | – | [24] | ||||
Tunisian Arabs | – | [24] | ||||
rs7901695 | African-American | C/T | [38] | |||
Italian | C/T | [39] | ||||
rs7903146 | African-American | T/C | [38] | |||
rs12255372 | European Caucasians | T | [40] | |||
Cameroonian | T/G | [41] | ||||
French | T/G | [37] | ||||
KCNJ11 | 11p15.1 | rs2285676 | Han Chinese | – | [42] | |
rs5215 | South Indian | C/T | [43] | |||
rs5219 | Mauritanian | – | [44] | |||
Chinese She | – | [32] | ||||
Chinese | T/C | [33] | ||||
Lebanese | – | [24] | ||||
Tunisian Arabs | – | [24] | ||||
DNAJC3 | 13q32.1 | – | Turkish | – | [45] | |
CDKAL 1 | 6p22.3 | rs10946398 | Han Chinese | C/A | [47] | |
rs775480 | Alaska Native | C/A | [48] | |||
SLC30A8 | 8q24.11 | rs13266634 | Chinese | C/T | [51] | |
Asian, European, African | C/T | [52] | ||||
Obesity | FTO | 16q12.2 | rs1558902 | Japanese | A/T | [19] |
rs9939609 | Scandinavian | A/T | [20] | |||
Spaniards | A/T | [21] | ||||
rs8050136 | Finnish | A/C | [22] | |||
Regulated insulin sensitivity in muscle and liver | ADIPOQ | 3q27 | rs1501299 | Chinese | – | [46] |
rs7627128 | Chinese | – | [46] | |||
rs182052 | Chinese | – | [46] | |||
Regulated insulin sensitivity in peripheral tissue | POMC | 2p23.3 | – | – | A/G | [49] |
Insulin sensitivity | PPARγ2 | 3p25.2 | rs1801282 | Caucasian | – | [50] |
Induced oxidative stress via ROS generation | Antioxidant genes | 1p13.3 | GSTM1del | – | – | [138] |
22q11.23 | GSTT1del | – | – | [138] | ||
11q13.2 | GSTP1 105I/V(+313A/G) | – | – | [138] | ||
11p13, 6q25.3 |
CAT-21A/T, SOD2 + 47C/T | – | – | [138] | ||
3p21.31 | GPx1 + 599C/T | – | – | [138] |
Abbreviations: Ref, Reference; SNP, single-nucleotide polymorphism; T2DM, type 2 diabetes mellitus.