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. 2019 Dec 23;14(12):e0226505. doi: 10.1371/journal.pone.0226505

Table 1. Summary of genetic diversity measures and test for Hardy-Weinberg Equilibrium (HWE) in southern African Nile crocodile populations.

OR-BNP-Nam: Okavango River system—Bwabwata National Park–Namibia, OR-OD-Bot: Okavango River system—Okavango Delta—Botswana, OR-OCR-Nam—Okavango Crocodile Ranch—Okavango River—Namibia, LK-Nam–Lower Kunene River—Namibia, LS-N-Mal–Lower Shire River (North)—Malawi, LS-S-Mal–Lower Shire River (South)—Malawi, and Limpo-SAf–Limpopo River—South Africa, KZN-SAf–KwaZulu-Natal—South Africa. N—number of individuals, An—number of alleles, Rs—mean allelic richness, He—expected heterozygosity, Ho—observed heterozygosity, and FIS—mean fixation index. Values were estimated based on genotypes determined using 11 nuclear microsatellite markers and averaged across all loci.

Population N An Rs He Ho Fis HWE (P-value)
OR-BNP-Nam 20 4.6 3.64 0.600 0.549 -0.009 0.616
OR-OD-Bot 29 6.0 3.73 0.624 0.613 0.011 0.486
OR-OCR-Nam 13 5.0 3.58 0.606 0.619 0.043 0.537
Okavango River (TOTAL) 62 5.2 3.65 0.610 0.594 0.001 0.554
Lower Kunene River (LK-Nam) 12 4.2 3.31 0.583 0.495 0.149 0.587
LS-N-Mal 27 6.9 4.29 0.664 0.617 0.098 0.337
LS-S-Mal 25 6.9 4.28 0.684 0.625 0.071 0.367
Lower Shire River (TOTAL) 52 6.9 4.29 0.674 0.621 0.085 0.352
Limpo-SAf 13 4.7 3.73 0.634 0.717 -0.104 0.273
KZN-SAf 10 4.4 3.82 0.639 0.390 0.348 0.249
South Africa (TOTAL) 23 4.6 3.78 0.637 0.554 0.182 0.261
Total dataset 149 11.7 3.76 0.723 0.594 0.144 0.002