Table 1.
DRG sample ID | SNP ID | Average reads (gDNA) | Average allelic imbalance (gDNA)a | Average reads (cDNA) | Average allelic expression imbalance (cDNA)a | Absolute fold change in allelic expressionb |
---|---|---|---|---|---|---|
379630 | rs11562975 | 19,899 | 0.98 | 22,034 | 0.57 | 1.7 |
385164 | rs11562975 | 16,624 | 1.14 | 30,039 | 0.41 | 2.4 |
390387 | rs11562975 | 21,689 | 1.06 | 19,849 | 0.63 | 1.6 |
390388 | rs28901637 | 735,899 | 0.95 | 632,781 | 0.41 | 2.4 |
397628 | rs13004520 | 460,612 | 1.02 | 148,654 | 0.01 | 99.0 |
397629 | rs11562975 | 409,588 | 0.94 | 367,027 | 0.12 | 8.2 |
aNumber of reads for minor allele divided by number of reads for common allele at the gDNA or transcript levels. bFold change in allelic expression regardless of which allele is increased in expression. cDNA, complementary DNA; DRG, dorsal root ganglia; gDNA, genomic DNA; SNP, single-nucleotide polymorphism.