Table 1.
List of genomic Nc (Ncavg) and genomic GC3 (GC3avg) along with standard deviation in the 92 species of soil bacteria analyzed in this study.
| Organism name | Genomic Nc (Ncavg) | Standard deviation of Ncavg | Genomic GC3 (GC3avg) | Standard deviation of GC3avg |
|---|---|---|---|---|
| Acidocella aminolytica DSM 11237 | 46.19 | 6.19 | 0.74 | 0.1 |
| Acidobacterium capsulatum ATCC 51196 | 41.72 | 7.09 | 0.8 | 0.1 |
| Acidiphilium cryptum JF-5 | 35.58 | 5.62 | 0.91 | 0.08 |
| Actinoalloteichus cyanogriseus DSM 43889 | 32.94 | 3.46 | 0.91 | 0.05 |
| Acidovorax delafieldii 2AN | 37.3 | 6.82 | 0.85 | 0.091 |
| Achromobacter denitrificans NBRC 15125 | 32.9 | 4.39 | 0.94 | 0.054 |
| Acidithiobacillus ferrivorans SS3 | 49.1 | 5.73 | 0.7 | 0.108 |
| Acidithiobacillus ferrooxidans ATCC 23270 | 47.23 | 5.83 | 0.75 | 0.098 |
| Acinetobacter calcoaceticus PHEA-2 | 45.43 | 5.05 | 0.3 | 0.08 |
| Acidithiobacillus caldus SM-1 | 45.34 | 6.13 | 0.77 | 0.092 |
| Acidiphilium multivorum AIU301 | 37.17 | 6.68 | 0.89 | 0.1 |
| Acidithiobacillus thiooxidans ATCC 19377 | 49.53 | 5.1 | 0.65 | 0.098 |
| Achromobacter xylosoxidans A8 | 35.29 | 5.87 | 0.9 | 0.072 |
| Agrobacterium tumefaciens 5A | 44.88 | 5.8 | 0.75 | 0.072 |
| Alcaligenes faecalis P156 | 44.47 | 5.15 | 0.71 | 0.08 |
| Azotobacter chroococcum NCIMB 8003 | 34.37 | 7.17 | 0.89 | 0.102 |
| Bacillus akibai JCM 9157 | 47.55 | 4.76 | 0.27 | 0.072 |
| Bacillus atrophaeus 1942 | 52.53 | 4.92 | 0.49 | 0.115 |
| Bacillus azotoformans LMG 9581 | 49.48 | 5.2 | 0.31 | 0.082 |
| Bacillus circulans NBRC 13626 | 46.97 | 4.92 | 0.29 | 0.077 |
| Bacillus clausii KSM-K16 | 53.14 | 4.4 | 0.48 | 0.084 |
| Bacillus cohnii NBRC 15565 | 46.17 | 4.9 | 0.26 | 0.074 |
| Bacillus drentensis NBRC 102427 | 51.82 | 5.22 | 0.37 | 0.097 |
| Bacillus firmus NBRC 15306 | 52.36 | 4.88 | 0.43 | 0.1 |
| Bacillus flexus Riq5 | 48.77 | 5.19 | 0.32 | 0.082 |
| Bacillus horikoshii DSM 8719 | 53 | 5.25 | 0.4 | 0.101 |
| Bacillus krulwichiae NBRC 102362 | 48.32 | 4.86 | 0.29 | 0.08 |
| Bacillus megaterium WSH-002 | 48.95 | 5.13 | 0.32 | 0.08 |
| Bacillus methanolicus MGA3 | 51.19 | 4.92 | 0.36 | 0.08 |
| Bacillus niacini NBRC 15566 | 50.99 | 4.92 | 0.33 | 0.08 |
| Bacillus novalis NBRC 102450 | 52.62 | 5.13 | 0.41 | 0.11 |
| Bacillus pseudofirmus OF4 | 50.57 | 5.14 | 0.34 | 0.08 |
| Bacillus pseudomycoides DSM 12442 | 44.4 | 5.19 | 0.25 | 0.07 |
| Bacillus pumilus NJ-V2 | 51.81 | 5.07 | 0.4 | 0.09 |
| Bacillus simplex SH-B26 | 52.98 | 5.44 | 0.4 | 0.1 |
| Bacillus soli NBRC 102451 | 52.52 | 5.07 | 0.4 | 0.1 |
| Bacillus vallismortis DV1-F-3 | 52.65 | 4.84 | 0.49 | 0.12 |
| Bacillus vireti LMG 21834 | 52.62 | 4.97 | 0.41 | 0.11 |
| Bdellovibrio bacteriovorus HD100 | 47.5 | 4.98 | 0.62 | 0.11 |
| Beggiatoa alba B18LD | 46.09 | 3.99 | 0.44 | 0.09 |
| Beijerinckia indica indica ATCC 9039 | 46.69 | 5.54 | 0.74 | 0.09 |
| Brevibacillus agri BAB-2500 | 46.81 | 5.74 | 0.71 | 0.13 |
| Burkholderia ambifaria IOP40-10 | 34.79 | 6.23 | 0.9 | 0.08 |
| Burkholderia anthina AZ-4-2-10-S1-D7 | 33.65 | 5.27 | 0.92 | 0.07 |
| Chlorobium phaeovibrioides DSM 265 | 49.15 | 4.75 | 0.6 | 0.08 |
| Chromobacterium subtsugae MWU2387 | 34.18 | 6.51 | 0.9 | 0.11 |
| Chromobacterium vaccinii 21-1 | 34.29 | 6.16 | 0.9 | 0.09 |
| Clostridium acetobutylicum EA 2018 | 39.63 | 3.87 | 0.15 | 0.05 |
| Clostridium argentinense CDC 2741 | 37.22 | 4.12 | 0.13 | 0.06 |
| Clostridium butyricum JKY6D1 | 35.93 | 3.34 | 0.1 | 0.05 |
| Clostridium cadaveris NLAE-zl-G419 | 38.64 | 4.05 | 0.13 | 0.06 |
| Clostridium cochlearium NLAE-zl-C224 | 35.46 | 3.89 | 0.12 | 0.05 |
| Clostridium pasteurianum DSM 525 = ATCC 6013 | 38.86 | 4.27 | 0.17 | 0.06 |
| Clostridium scatologenes ATCC 25775 | 37.26 | 4.01 | 0.12 | 0.06 |
| Clostridium sporogenes NCIMB 10696 | 35.92 | 4.2 | 0.13 | 0.05 |
| Clostridium tetani 12124569 | 36.22 | 3.75 | 0.13 | 0.05 |
| Desulfobacterium autotrophicum HRM2, DSM 3382 | 50.5 | 4.43 | 0.59 | 0.1 |
| Desulfobacter postgatei 2ac9 | 51.08 | 4.72 | 0.59 | 0.11 |
| Desulfocapsa sulfexigens DSM 10523 | 53.33 | 3.97 | 0.46 | 0.08 |
| Desulfobacula toluolica Tol2 | 51.36 | 4.06 | 0.47 | 0.1 |
| Flavobacterium pectinovorum DSM 6368 | 44.65 | 5.05 | 0.26 | 0.09 |
| Flavobacterium suncheonense GH29-5, DSM 17707 | 48.92 | 5.39 | 0.49 | 0.15 |
| Hyphomicrobium denitrificans 1NES1 | 45.9 | 5.75 | 0.74 | 0.07 |
| Micromonospora aurantiaca ATCC 27029 | 30.94 | 3.68 | 0.93 | 0.05 |
| Micromonospora carbonacea DSM 43168 | 30.37 | 3.84 | 0.95 | 0.06 |
| Micromonospora chokoriensis DSM 45160 | 32.76 | 3.68 | 0.9 | 0.05 |
| Micromonospora echinospora DSM 43816 | 31.66 | 3.79 | 0.92 | 0.05 |
| Micrococcus luteus NCTC 2665 | 29.99 | 3.91 | 0.95 | 0.05 |
| Micromonospora purpureochromogenes DSM 43821 | 30.68 | 3.93 | 0.94 | 0.05 |
| Nitrosomonas communis Nm2 | 53.58 | 4.32 | 0.47 | 0.11 |
| Nitrosomonas europaea ATCC 19718 | 51.29 | 4.55 | 0.58 | 0.1 |
| Nitrobacter hamburgensis X14 | 42.46 | 6.34 | 0.81 | 0.09 |
| Nitrobacter winogradskyi Nb-255 | 42.18 | 5.47 | 0.82 | 0.08 |
| Nocardia cerradoensis NBRC 101014 | 36.42 | 4.14 | 0.88 | 0.05 |
| Nocardia otitidiscaviarum IFM 11049 | 35.12 | 4.34 | 0.89 | 0.05 |
| Pseudomonas azotoformans S4 | 40.16 | 6.64 | 0.81 | 0.1 |
| Pseudomonas citronellolis P3B5 | 30.22 | 6.2 | 0.93 | 0.09 |
| Pseudomonas fluorescens A506 | 40.55 | 6.41 | 0.8 | 0.1 |
| Pseudomonas mendocina NK-01 | 37.69 | 6.15 | 0.81 | 0.08 |
| Pseudomonas oryzihabitans USDA-ARS-USMARC-56511 | 35.46 | 4.96 | 0.87 | 0.07 |
| Pseudomonas putida 1A00316 | 34.37 | 6.43 | 0.87 | 0.09 |
| Rhizobium gallicum IE4872 | 44.3 | 6.45 | 0.76 | 0.08 |
| Streptomyces avermitilis MA-4680 | 33.27 | 4.15 | 0.91 | 0.06 |
| Streptomyces clavuligerus ATCC 27064 | 32.89 | 4.08 | 0.92 | 0.06 |
| Streptomyces hygroscopicus limoneus KCTC 1717 | 31.82 | 4.24 | 0.92 | 0.06 |
| Streptomyces noursei ATCC 11455 | 32.47 | 4.94 | 0.92 | 0.07 |
| Streptomyces rubidus CGMCC 4.2026 | 31.06 | 3.98 | 0.94 | 0.05 |
| Streptomyces scabrisporus DSM 41855 | 33.76 | 3.92 | 0.9 | 0.05 |
| Streptomyces vitaminophilus ATCC 31673 | 32.37 | 3.56 | 0.92 | 0.05 |
| Thiobacillus denitrificans ATCC 25259 | 36.2 | 5.29 | 0.89 | 0.07 |
| Vibrio gazogenes DSM 21264 | 52.1 | 4.53 | 0.5 | 0.11 |
| Vibrio natriegens NBRC 15636 | 51.65 | 6.35 | 0.42 | 0.1 |