| 5′-dRP | 5′-2-deoxyribose-5′-phosphate |
| 6-4PP | Pyrimidine-(6,4)-pyrimidone product |
| 8-oxoG | 8-oxo-7,8-dihydroguanine |
| Abasic site | Apurinic/apyrimidinic site or AP site |
| AD | Alzheimer’s disease |
| APE1 | AP endonuclease 1 |
| BER | Base excision repair |
| cdA | 5′,8-cyclo-2′-deoxyadenosine |
| cdG | 5′,8-cyclo-2′-deoxyguanosine |
| CPD | Cyclobutane pyrimidine dimer |
| CSB | Cockayne syndrome B |
| dL | 2-deoxyribonolactone |
| DPCs | DNA–protein crosslinks |
| FEN1 | Flap endonuclease 1 |
| GG-NER | Global genome NER |
| Gh | Guanidinohydantoin |
| HR23B | Human RAD23 homolog B |
| ICL | Interstrand crosslink |
| MBD4 | Methyl-binding domain glycosylase 4 |
| MPG | Methylpurine glycosylase |
| MYH | MutY homolog DNA glycosylase |
| NEIL1 | Endonuclease VIII-like glycosylase |
| NER | Nucleotide excision repair |
| NTH1 | Endonuclease III-like glycosylase |
| OGG1 | 8-oxoguanine DNA glycosylase |
| PCNA | Proliferating cell nuclear antigen |
| Polβ | DNA polymerase β |
| RNAPII | RNA polymerase II |
| ROS | Reactive oxygen species |
| SMUG1 | Single-strand-specific monofunctional uracil DNA glycosylase |
| Sp | Spiroiminodihydantoin |
| TC-NER | Transcription-coupled NER |
| TDG | Thymine DNA glycosylase |
| TFIIH | Transcription Factor II H; complexed with the XPB and XPD helicases |
| TTD | Trichothiodystrophy |
| UNG | Uracil-N glycosylase |
| UV-DDB | UV-damaged DNA binding protein; a heterodimeric complex with DDB1 and DDB2 |
| XPC | Xeroderma pigmentosum C |
| XRCC1 | X-ray repair cross-complementing protein 1 |