TABLE 1.
Cluster of orthologous groups categories of L. fermentum YL-11.
| COG class | Name | Count | Proportion |
| C | Energy production and conversion | 77 | 4.12% |
| D | Cell cycle control, cell division, chromosome partitioning partitioning | 29 | 1.55% |
| E | Amino acid transport and metabolism | 178 | 9.51% |
| F | Nucleotide transport and metabolism | 97 | 5.18% |
| G | Carbohydrate transport and metabolism | 126 | 6.73% |
| H | Coenzyme transport and metabolism | 99 | 5.29% |
| I | Lipid transport and metabolism | 77 | 4.12% |
| J | Translation, ribosomal structure and biogenesis | 186 | 9.94% |
| K | Transcription | 107 | 5.72% |
| L | Replication, recombination and repair | 96 | 5.13% |
| M | Cell wall/membrane/envelope biogenesis | 105 | 5.61% |
| N | Cell motility | 12 | 0.64% |
| O | Posttranslational modification, protein turnover, chaperones | 54 | 2.89% |
| P | Inorganic ion transport and metabolism | 98 | 5.24% |
| Q | Secondary metabolites biosynthesis, transport and catabolism | 25 | 1.34% |
| R | General function prediction only | 173 | 9.25% |
| S | Function unknown | 90 | 4.81% |
| T | Signal transduction mechanisms | 67 | 3.58% |
| U | Intracellular trafficking, secretion, and vesicular transport | 14 | 0.75% |
| V | Defense mechanisms | 44 | 2.35% |
| W | Extracellular structures | 3 | 0.16% |
| X | Mobilome: prophages, transposons | 114 | 6.09% |