Table 5.
SNPs identified for the resistance to azithromycin (AZM) by DNP-AAP
| ID Range | ID | AAP | Genes | Annotations | Known |
|---|---|---|---|---|---|
| 27421 | 0.424 | NGK_1776 | conserved hypothetical protein | ||
| 27690 | 0.420 | NGK_1793 | putative drug resistance protein | ||
| 30659 | 0.300 | NGK_2022 | Infection response protein Irg2 | ||
| 36328 | 0.294 | NGK_2342 | pilC protein | ||
| 36810 | 0.290 | intergenic between NGK_2354 and NGK_2355 ∗ | |||
| 30434 | 0.278 | intergenic between NGK_1994 and NGK_1995 ∗ | |||
| 21513 | 0.269 | NGK_1463 | putative phage associated protein | ||
| 39676 | 0.266 | NGK_2537 | homoserine kinase | ||
| 36809 | 0.258 | intergenic between NGK_2354 and NGK_2355 ∗ | |||
| 29095 | 0.254 | NGK_1872 | phosphatidylglycerophosphatase A |
Annotations are from EnsemblBacteria. The column “ID Range” lists the ranges of SNPs that fall in known AMR-associated genes (only) in our data. ID: ID of Identified SNP
*NGK_2354: Conserved hypothetical protein; NGK_2355: Hypothetical protein; NGK_1994: TspB2; NGK_1995: putative phage associated protein