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. 2019 Dec 23;19:578. doi: 10.1186/s12870-019-2122-2

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Characteristics of the perfect SNPs used to genotype pepper varieties by Target SNP-seq. a Distribution of the 92 perfect SNPs in the ideogram of the genome of C. annuum Zunla-1 [3]. b Observed heterozygosity (Ho) per SNP locus, colored in red. c Expected heterozygosity (He) per SNP locus is presented in green. d Polymorphism information content (PIC) per SNP locus is presented in blue. e Minor allele frequency (MAF) per SNP locus is given in yellow. This figure was generated using Circos (http://circos.ca/) with the SNP region magnified to 2 Mb