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. Author manuscript; available in PMC: 2020 May 25.
Published in final edited form as: Nat Med. 2019 Nov 25;25(12):1858–1864. doi: 10.1038/s41591-019-0650-9

Fig. 3. GoPhAST-R detects antibiotic-responsive transcripts directly from positive blood culture bottles.

Fig. 3.

Heatmaps of normalized, log-transformed fold-induction of the top 10 ciprofloxacin-responsive transcripts from 8 positive blood culture bottles that grew either E. coli (6 independent bottles, A-F) or K. pneumoniae (2 independent bottles, G-H). CLSI classifications of isolates performed by the clinical microbiology laboratory, which were blinded until analysis was complete, are displayed below each heatmap.