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. 2019 Dec 20;10:1659. doi: 10.3389/fpls.2019.01659

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Copyright © 2019 Wei, Zhao, Xu, Feng, Shi, Deakin, Feng and Zhu

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Tree views of the relative abundance between wilt-tolerant and wilt-susceptible cotton cultivars for rhizosphere bacteria; the relative difference in abundance is expressed as log2FoldChange with the values indicating that the relative abundance of specific OTUs was greater in the wilt tolerant cultivar samples than in susceptible cultivar samples. The size of nodes represents the abundance of rhizosphere bacteria at the specific taxonomic rank. Those OTUs that could not be assigned reliably to a taxonomic rank below Kingdom have been excluded from the graph. The graph is drawn with the R package—Metacoder (Foster et al., 2017).