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. Author manuscript; available in PMC: 2019 Dec 27.
Published in final edited form as: Cell. 2017 Mar 23;169(1):108–119.e20. doi: 10.1016/j.cell.2017.03.006
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Mouse anti-CD69 conjugated to Alexa647 (FN50) Thermo Fisher Scientific Cat#: MA5-18150; RRID: AB_2539524
anti-phosphoERK (rabbit polyclonal) Cell Signaling Technology Cat#: 9101; RRID:AB_331646
Chemicals, Peptides, and Recombinant Proteins
His10-SNAPf-ybbr13 This study
His10-CLIPf-ybbr13 This study
Latrunculin A Sigma Cat#: L5163-100UG
BC-GLA-NHS New England Biolabs Cat#: S9237S
BG-GLA-NHS New England Biolabs Cat#: S9151S
Puromycin dihydrochloride Sigma Cat#: P8833-10MG
Experimental Models: Cell Lines
Human: JRT3 Art Weiss; Ohashi et al., 1985
Human: JRT3 expressing DNA-CARζ-GFP This study
Human: JRT3 expressing DNA-CARζ-GFP/ZAP70-mCherry This study
Human: JRT3 expressing DNA-CARζ-IRESpuro/ZAP70-GFP This study
Human: JRT3 expressing DNA-CARζ-IRESpuro/ZAP70-GFP This study
Human: JRT3 expressing DNA-CARTCR/ZAP70-GFP This study
Human: P116 Art Weiss; Williams et al., 1998
Human: P116 expressing DNA-CARζ-IRESpuro/ZAP70-GFP This study
Human: HEK293T ATCC Cat#: CRL-3216
Recombinant DNA
pHR-DNA-CARζ-GFP This study
pHR-DNA-CARζ-IRESpuro This study
pHR-SP-SNAPf:TCRβ-IRESpuro This study
pHR-TCRα-E2A-SNAPf:TCRβ-P2A-CD3ε-P2A-CD3ζ This study
pHR-ZAP70-GFP James and Vale, 2012
pHR-ZAP70-mCherry James and Vale, 2012
Oligonucleotides
A full list of oligonucleotides is presented in Table S1. N/A N/A
Software and Algorithms
GraphPad Prism v6 GraphPad http://www.graphpad.com/scientific-software/prism/
MATLAB Mathworks https://www.mathworks.com/
vbFRET Bronson et al., 2009 http://vbfret.sourceforge.net/
FIJI NIH https://fiji.sc/
Cell Profiler 2.1.1 The Broad Institute http://cellprofiler.org/
μManager Open Imaging https://open-imaging.com/
C script to analyze stochastic signaling model This study https://github.com/kabirhusain/mjtayloretal_clustergillespie